KEGG   Nitrospira defluvii: NIDE2556
Entry
NIDE2556          CDS       T01281                                 
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
  KO
K01627  2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
Organism
nde  Nitrospira defluvii
Pathway
nde00540  Lipopolysaccharide biosynthesis
nde01100  Metabolic pathways
nde01250  Biosynthesis of nucleotide sugars
Module
nde_M00063  CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:nde00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    NIDE2556 (kdsA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:nde01005]
    NIDE2556 (kdsA)
Enzymes [BR:nde01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.55  3-deoxy-8-phosphooctulonate synthase
     NIDE2556 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:nde01005]
 Lipid A
  NIDE2556 (kdsA)
SSDB
Motif
Pfam: DAHP_synth_1 NeuB
Other DBs
NCBI-ProteinID: CBK42265
UniProt: D8PG78
Position
2500433..2501254
AA seq 273 aa
MAYEVDLEQFKIGAGHRPFLIAGPCVIESEQLAMDTAGRIAEIAKAIGMPYVFKSSFDKA
NRTSITSFRGPGLEKGLAVLARVKQQIGVPVLTDVHSEEQATEAGRVVDILQIPAFLCRQ
TDLLIAAAKTGKVVNIKKGQFLSPPEMGNAVKKVEDSGNRRIVLTERGSSFGYNNLVVDM
RSFPIMRRFGYPVVFDATHSVQLPGGGGTKSSGQREFVETLACAAAGAGCDGFFMEVHPD
PDSALSDGPNMVPLHTLHSLLERVLRIWDAAAK
NT seq 822 nt   +upstreamnt  +downstreamnt
atggcgtacgaagtggatttggaacagtttaagatcggggcggggcatcggccgtttttg
atcgccggcccttgcgtgatcgaaagtgagcaacttgccatggatacggcgggacgtatt
gcggagatcgccaaggcgatcggcatgccctacgtctttaagtcgtccttcgacaaggcc
aatcgcacctccatcacctcctttcggggaccgggcttggagaagggcttggccgtgctc
gccagggtcaagcaacagatcggggtgccggtgctgaccgatgtccattcggaagaacag
gccacagaggccggtcgcgtcgtggatatcctgcagattccggcctttctctgtcgccag
accgacctcttgatcgccgctgccaagacgggcaaggtcgtcaatatcaagaagggacag
tttctgtccccgccggaaatgggcaacgcggtgaagaaagtggaagacagcgggaaccgg
cgcatcgtgttgaccgaacggggctcctccttcggctacaataatctggtcgtggacatg
cgctcctttcccatcatgcgccggttcggctacccagtggtcttcgacgcgacccacagc
gtgcaactccccggcggaggcggcacgaaatccagcggtcagcgcgaattcgtggaaaca
ttggcctgtgcggcggcaggcgccggctgcgacgggttcttcatggaagtgcaccccgac
ccggattccgcgttgtctgacggaccgaacatggtcccgctgcatacgcttcactcactt
ctcgaacgggtactacgtatatgggacgcagccgcaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (64)   
   KEGG ORTHOLOGY (1)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (82)   

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