KEGG   Nanoarchaeum equitans: NEQ088
Entry
NEQ088            CDS       T00152                                 
Name
(GenBank) NEQ088
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
neq  Nanoarchaeum equitans
Pathway
neq03030  DNA replication
neq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:neq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NEQ088
   03410 Base excision repair
    NEQ088
   03450 Non-homologous end-joining
    NEQ088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:neq03032]
    NEQ088
   03400 DNA repair and recombination proteins [BR:neq03400]
    NEQ088
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:neq04147]
    NEQ088
DNA replication proteins [BR:neq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NEQ088
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     NEQ088
DNA repair and recombination proteins [BR:neq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NEQ088
Exosome [BR:neq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   NEQ088
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH 5_3_exonuc_N HHH_5
Other DBs
NCBI-ProteinID: AAR38943
UniProt: P61942
Position
81536..82555
AA seq 339 aa
MGVNLKEIVDPVKKEIEFKQLFGKVIAIDAFNALYQFLFSIRQDGEPLRDSKGRITSHLS
GLFYRTINLLEYGIKPIYVFDGTPPKFKIVAWEKRKKHKEQLESKYKEALKKGNIQEAIK
YAKSLGKLDSYMVEEAKKLLEAMGIPYVQAPSEGEAEAAYLTKKGVSDYCGSQDYDSLLF
GSPRVVRNITISEKRKLPGKNIYVEVKPEVIELEAVLNYWKITREQLIAIAMLLGTDYNE
KVPGIGPKTAIEIVKRFGDPIKVIEYYKIPNGKEIFEFFLNPPVIDFEPKWGKPNKELIF
KILVEEHDFNPERVERAIERLEKALNKINQKTLFSFFGS
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgggtgtaaacttaaaagagatagtagatcctgtaaaaaaggaaatagagtttaagcaa
ttgtttggaaaagttatagccattgatgctttcaatgctttataccaatttttattttct
attagacaagatggagaacctttgagagatagcaaaggcaggataacctcccatctatct
ggtttgttctatagaactataaatttgttagaatatggtataaaaccaatctatgttttt
gatggcacccccccaaaatttaaaattgttgcatgggaaaaaagaaaaaaacataaggaa
caattagaaagcaaatacaaagaagcgttgaaaaaaggtaatatacaagaagcaataaaa
tatgcaaaaagcttgggcaaactagatagttatatggttgaagaagccaaaaaattgttg
gaagcgatgggtataccctatgtgcaagcccctagcgaaggggaagcagaagctgcttat
ttaactaaaaagggtgtttctgattattgtggtagccaagattatgactctctattgttt
ggttctccaagggttgttaggaatataactattagcgaaaaaagaaaattgccaggcaaa
aatatttatgtggaagtaaaaccagaggtaatagagttagaagcagtattaaattattgg
aagataactagagaacaattaatagctattgccatgcttttaggaacagattataatgaa
aaagtccctggcatagggccaaaaacagcaatagaaatagtaaaaaggttcggcgatcca
ataaaagttatagaatactataaaatacccaatggaaaggaaatattcgagtttttcctt
aaccccccggtcatagattttgaacctaaatggggaaaaccaaacaaagagctaatattt
aaaattttggtagaagagcatgactttaacccagaaagagtagagagagcaatcgaaaga
ttagaaaaagctcttaataagataaatcaaaaaactttatttagcttttttggtagttag

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