KEGG   Nocardia farcinica: nfa50200Help
Entry
nfa50200          CDS       T00207                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
nfa  Nocardia farcinica
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:nfa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    nfa50200
Enzymes [BR:nfa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     nfa50200
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     nfa50200
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
NIH_Japan: 
UniProt: 
Position
complement(5234919..5235788)
Genome map
AA seq 289 aa AA seqDB search
MPELPEVEALAQFLREHAVGAVVGRVDVAALSAVKTFDPPVTALSGRDVSGAARWGKFLG
MDCSGLWLITHLSRGGWLRWIDEPNPNPPKPGGKSPLALRVHFFTPEGATPAFDLTEAGT
KKRLAVYVVDDPKLVPGIARLGPDALEVSEPQFAELLHGTSQRLKTALVDQALLAGIGNA
YSDEILHTAKISPFANTKTLPAEKIAELYAAMRAVLTDAVQRSVGQDAARLKGEKRSGMR
VHARTGQPCPVCGDTVREVSYAERSFQYCPTCQTGGKVLADRRMSRLLK
NT seq 870 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgagctacccgaagtggaggcgctggcccagttcctgcgcgaacacgccgtcggc
gcggtggtggggcgagtcgatgtggccgcgctgagcgcggtgaagaccttcgacccgccg
gtcaccgcgctgtccggccgcgacgtcagcggcgcggcacgctggggcaagttcctcggc
atggactgttcggggctgtggctgatcacgcatctgtcccgcggcggctggctgcgctgg
atcgacgaacccaacccgaatccacccaagcccggcggcaagagcccgctggcgctgcgg
gtgcacttcttcacccccgagggcgccacacccgcgttcgacctcaccgaggcgggcacc
aaaaagcgtctggccgtctacgtggtcgacgatcccaagctggtccccggtatcgcccgg
ctcgggcccgacgcgctcgaggtgagcgaaccccagttcgccgaactcctgcacggcacc
tcgcagcggctcaagaccgcgctggtggatcaggcgctgctcgcgggcatcggcaacgcc
tactccgacgagatcctgcacaccgccaagatctcgccgttcgccaacaccaagaccctg
cccgccgagaagatcgccgaactctacgcggcgatgcgcgccgtgctcaccgacgcggtg
cagcgctcggtggggcaggacgcggcccggctcaagggcgagaaacgctcgggcatgcgg
gtgcacgcccgcaccggccagccctgcccggtgtgcggggacaccgtgcgcgaggtctcc
tacgccgaacggtcgttccagtactgccccacctgccagaccggcgggaaggtgctcgcc
gaccggcgcatgtcgcggctgctcaagtga

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