KEGG N.farcinica: nfa9150

Nocardia farcinica: nfa9150

Entry

nfa9150 CDS N.farcinica

Gene name dnaE2

Definition error-prone DNA polymerase (EC:2.7.7.7)

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway nfa00230 Purine metabolism
nfa00240 Pyrimidine metabolism
nfa01100 Metabolic pathways
nfa03030 DNA replication
nfa03430 Mismatch repair
nfa03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:nfa00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:nfa00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:nfa03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:nfa03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:nfa03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha PHP tRNA_anti
PROSITE: RIBOSOMAL_L10 ALA_RICH

Other DBs NCBI-GI: 54022882
NCBI-GeneID: 3109823
NIH_Japan: 9150
UniProt: Q5Z1D1

Position 1016558..1019998

AA seq 1146 aa
MGWGTGPPSWSELERVLSGRPGRTDPEAMYPGDGGDSPAWSRKREPYLAEPIRPVDRPTV
PYAELHAHSAYSFLDGASQPEELVEEAVRLGLEAIALTDHDGFYGTVRFAEAAKEWGIAT
VFGAELSLGVARPAPRRSARKAARGRGRAVRYAATPEFEHAAAPDSAPRTGEPDPPGPHL
LVLARGQEGYRRLSREIAAAHLAAGEKGVLRYDIDALTAAAGGHWHILTGCRKGHLRTAL
ADDLAAGETGLPRAEAALRDLVERFGADRVSVELTHHGVPADDERNALLIALADRVGLPV
LATTGAHFAGPEQRRRAMALAAIRARRSLDEMAGWLAPAGGAHLRSGAEMARLFAACPDA
VANAVALSRECAFDLRLIAPQLPPFAVPDGHDENSWLRELVLRGAARRYGPPHANPPAYR
QLEHELEVIATLGFPGYFLVVHDIVSFCERNGILCQGRGSAANSAVCFAIGITNVDPVAN
ELLFERFLSPERDGPPDIDIDIESDRREEAIQHVYARYGREYAAQVANVITYRGKSAVRD
AAKALGFSPGQQDAWSKQVSRWTGVGAETGTDIPEQVLRLAADLEGLPRHMGIHSGGMVI
CDRPIADVCPVEWARMAGRSVLQWDKDDCAAVGLVKFDMLGLGMLSALHYMIDLVREHEG
VEVRLHELDLKEPAVYEMLSRADSVGVFQVESRAQMATLPRLRPREFYDLVVEVALIRPG
PIQGGSVHPYIRRRNGTEPVTYDHPALENSLGRTLGVPLFQEQLMQMAVDVAGFTAAEAD
QLRRAMGSKRSPERMRRLKERLYRGMAELHGITGEVADRIYEKLYAFANFGFPESHSQSF
AALVFYSAWFKLHHPAAFCAGLLRAQPMGFYSPQSLVADARRHGVPVHGPDVNASLAEAT
LENGGREVRLGLAGVRHIGSELAERIVAARVEHGPYTSVLDLTGRVELTVAQAEALATAG
AFDSVTGPSGAERSGGRRAALWAAGAAARERAHLLPGTGPAADAPALPGMSALELAAADV
WATGISPGSYPTEFLRARMDELGVIPAGRLLEVRDGSRVLVGGAVTHRQRPATAAGVTFL
NLEDETGMVNVVCSVGLWTRYRALAQSASALLVRGRVQNAEGAVSVVAEHLQLLSLGMGS
RSRDFR

NT seq 3441 nt +upstreamnt +downstreamnt
atgggctggggtaccgggccgccctcgtggtcggagctggaacgggtgctctcgggtcgt
cccggccggacggacccggaagccatgtaccccggcgacggcggcgacagcccggcctgg
tcccgcaagcgcgagccctacctggccgagccgatccgacccgtcgaccgcccgacggtg
ccctacgccgagctgcacgcgcattcggcctacagcttcctcgacggtgcgagccagccg
gaggaactggtggaggaggccgtgcggctggggctggaggccatcgccctcaccgaccac
gacggcttctacggcaccgtgcggttcgccgaggccgccaaggagtggggcatcgccacc
gtcttcggcgcggagctgtcgctcggcgtggcgcggcccgcaccccggcggagtgcccgc
aaggcggcgcggggccgcggccgtgccgtacggtacgccgccacaccggaattcgagcac
gccgcggctcccgactcggcgccgcgcaccggcgagcccgacccgccgggaccgcacctg
ctcgtgctcgcccgcgggcaggaggggtatcgccggttgtcccgcgagatcgcggccgcg
catctggcggcgggggagaagggcgtgctccgctacgacatcgatgccctcaccgccgcg
gccggcgggcactggcacatcctgaccggctgccgcaaggggcatctgcgcacggcactc
gcggacgacctggcggcgggcgagaccggcctgccgcgcgccgaggccgcactgcgcgac
ctggtcgagcggttcggcgccgaccgggtgagcgtggaactcacccaccacggcgtcccg
gcggacgacgagcgcaatgccctgctcatcgccctcgccgaccgggtcggcctgccggtg
ctggcgaccaccggcgcccatttcgccggtcccgagcagcggcgacgggcgatggcgctg
gccgccatccgcgcccggcgcagcctggacgagatggcgggctggctggccccggccggc
ggcgcgcacctgcgttccggcgcggagatggcgcggctgttcgccgcctgccccgacgcg
gtggccaatgccgttgcgctgtcccgggaatgcgcgttcgacctgcgcctgatcgcgccc
caactgccgccgttcgcggtgccggacggtcacgacgagaactcctggctgcgcgaactg
gtactgcgcggcgcggcgcggcgctacggcccgccgcacgccaacccgcccgcctaccgc
cagctcgaacacgagctcgaggtgatcgccaccctcggcttccccggctatttcctcgtg
gtgcacgacatcgtcagcttctgtgagcggaacggaatcctctgccagggccgcggttcg
gcggccaactccgcggtctgcttcgccatcggcatcaccaatgtcgacccggtggccaac
gagctgctgttcgagcgcttcctgtccccggaacgcgacgggccccccgacatcgacatc
gacatcgagtccgaccgcagggaggaggccatccagcacgtctacgccaggtacggccgg
gaatacgccgcgcaggtggccaatgtgatcacctaccgcggcaagtcggcggtacgtgac
gcggccaaggcgctggggttctcgcccggccagcaggacgcctggagcaaacaggtcagc
cgctggaccggggtcggcgccgagaccggcaccgacattcccgaacaggtgttgcgcctg
gccgccgacctcgagggcctgccgcggcacatgggcatccattccggcggcatggtgatc
tgcgaccggcccatcgccgacgtgtgcccggtggagtgggcgcgcatggccgggcgcagt
gtcctgcaatgggacaaggacgattgcgccgcggtcgggctggtgaagttcgacatgctc
ggcctgggcatgctctcggcactgcactacatgatcgacctggtgcgcgagcacgagggc
gtcgaggtgcggctgcacgagctcgacctgaaggaacccgcggtctacgagatgctctcg
cgcgccgactcggtcggtgtcttccaggtggagtcgcgggcgcagatggcgacgctgccc
cggctgcgaccgcgcgagttctacgacctggtggtggaggtcgcgctgattcggccgggt
ccgatccagggtggttccgtgcacccctacatccgccgccgcaacggcaccgagccggtc
acctacgaccatccggcgctggagaattcgctcggccgcacgctcggggtgccgctgttc
caggaacagctcatgcagatggcggtcgacgtcgccggcttcaccgccgccgaggccgac
cagctgcgccgggcgatggggtccaagcgctcgcccgagcggatgcggcggttgaaggaa
cgcctctaccgggggatggccgagttgcacggcatcaccggcgaggtcgccgaccggatc
tacgagaagctctacgccttcgccaatttcggcttcccggaaagtcattcgcagagcttc
gcggcgctcgtcttctattcggcctggttcaagttgcaccatccggccgcgttctgcgcc
gggctgctgcgcgcgcagccgatggggttctattcgccgcagtcgctggtggccgacgcg
cgcaggcacggggtaccggtgcacgggcccgacgtcaacgccagtctggccgaggccacc
ctggagaacggcgggcgcgaggtccggctcggcctggccggggtgcgccacatcgggtcg
gagctggccgagcgcatcgtcgccgcccgcgtcgaacacggcccctacacctcggttctc
gacctcaccgggcgcgtggaactgaccgtcgcgcaggccgaggcgttggccacggcgggc
gcgttcgacagtgtcaccggcccgtccggcgccgagcgctccggtgggcggcgggcggcg
ctgtgggcggcgggggcggcggcgcgggaacgcgcgcatctgctgcccggcaccggcccg
gccgccgacgcgcccgctctgcccgggatgagcgcgctcgaactcgccgccgccgacgtc
tgggccaccgggatctcacccggcagttatccgaccgaattcctgcgcgcccgcatggac
gaactcggtgtgatcccggcgggccggctgctcgaggtgcgcgacggttcgcgggtgctg
gtgggcggggcggtcacgcaccggcagcgcccggccaccgcggcgggcgtcaccttcctc
aatctggaggacgagaccgggatggtgaacgtggtctgctcggtgggcttgtggacgcgc
tatcgcgcactcgcccaaagcgcttcggcgttgctggtgcgcgggcgggtgcagaacgcg
gagggggcggtcagcgtggtcgccgagcatctgcagctgttgtcgttgggcatggggtcg
cgctcgcgcgatttccgttga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   NIH_JAPAN-NFA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (3)   
   PROSITE (2)   
All databases (22)

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