KEGG   Aspergillus fischeri: NFIA_021540
Entry
NFIA_021540       CDS       T01070                                 
Name
(RefSeq) transcription initiation factor TFIID subunit, putative
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
nfi  Aspergillus fischeri
Pathway
nfi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nfi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NFIA_021540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nfi03021]
    NFIA_021540
   03036 Chromosome and associated proteins [BR:nfi03036]
    NFIA_021540
Transcription machinery [BR:nfi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     NFIA_021540
   Coactivators
    SAGA/TFTC/STAGA complex
     NFIA_021540
Chromosome and associated proteins [BR:nfi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     NFIA_021540
    STAGA complex
     NFIA_021540
    TFTC complex
     NFIA_021540
    SAGA complex
     NFIA_021540
    SLIK complex
     NFIA_021540
SSDB
Motif
Pfam: WD40 TFIID_NTD2 ANAPC4_WD40 NBCH_WD40 LisH Nup160 eIF2A
Other DBs
NCBI-GeneID: 4591008
NCBI-ProteinID: XP_001265342
UniProt: A1D4V2
Position
Unknown
AA seq 745 aa
MSAPGGAPSPAPRSASIGPGGGGMSMPPQQPMGNTTPVGAPTPGPPPPPPSGAMSQQNLN
QIVIDYLAKKGYSRTEAMLRMESANQEIDGRPLPPLGEDARPKYRMGFDILKVWVEDNLD
LYKPELRRVLWPLFVYSFLNMVTSFYPQEAKQFFDINKNLFLPEHTDDVRKLEPISLPEH
VQDNATAKLYRNNKYRLVLSNPAFSNLMQFLENKSKEGGSVMSAILSSYCTIITKERASD
DRFSFAAMLGQAGAGQTFPAEDEGIPGHHPGSAYTGDNPAMAGTLPRLRLGKLPMESTLE
TDVRGELADEDMKNPPAPGHNSLVQEFDQMIKKEEDDEAPSRADIPYPPSTARDVALEVQ
KVKENRDRFRIEGRTGGVGPAVSVCMFTFHNTYDGINCLDFSDDNMLVAAGMQESYIRVW
SMDGKKIQTTYDNVDDAPPSNSRRLIGHSGPVYAVAFAPSATRSEGAVAPTNARWLLSSS
ADKTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRI
FVGHDQDVDCVCFHPNSAYVFTGSSDHTVRMWAVTTGNAVRMFTGHTGNITALACSRDGK
LLASADDQGSILLWDLAPGRLLKRMRGHGKGGIWSLSWSVESTVLVSGGADGTVRVWDVT
GPAQDPSQGRVVGEGGAGTKVDAGNPSAASTQPSTSVAPGMGKKKGKDVVVTPDQISAFP
TKKSPVYKVKFTNMNLIIAGGAYLP
NT seq 2238 nt   +upstreamnt  +downstreamnt
atgtctgcgccaggcggggctccgagccctgcacctcgaagtgcaagcatcggccccggt
ggtggtggtatgtctatgcctccccagcagcccatgggaaacaccactccagtgggagca
ccgactccgggtcctccacctccaccgccgagtggtgcgatgtcgcagcagaatctgaat
caaatagtcattgattacctggccaagaaaggatacagccgtactgaagccatgctgcgc
atggaatcagctaaccaagaaatcgatggccgtcctttgcctccccttggcgaggatgcg
cgtcccaagtatagaatggggttcgatatactgaaagtctgggttgaagacaatctagat
ctgtacaagcccgaacttaggcgtgttctgtggccgctctttgtctactctttcctcaac
atggtgacatccttttatcctcaagaggccaagcagttctttgatataaacaagaacctg
ttcctccctgagcacacagacgatgtccgtaaactggagcccatcagtcttcctgagcat
gttcaggacaacgccacggccaaactctaccggaataacaagtatcgcttagtactcagc
aacccagcattttcgaaccttatgcagtttctcgaaaacaagtcgaaagagggaggctct
gttatgtccgctattctgagcagctactgcacaatcattaccaaagagcgtgcgtccgac
gatcgtttcagcttcgctgctatgttaggccaagctggagcagggcagacatttcccgct
gaagacgaaggtattcccggtcaccatcctggatcggcctacacaggcgacaatccggca
atggctggaacattaccccggctccgactgggcaagcttcctatggaatcaacgcttgag
accgacgtacgaggcgaattagcagacgaagacatgaagaaccctccggcacctggccac
aacagtcttgtgcaggagtttgaccagatgatcaaaaaggaagaagatgacgaagcgccc
agtcgtgccgatattccataccctccctcgactgctcgcgatgtggctctggaagttcaa
aaggtgaaagagaatcgtgatcggttcaggattgagggccggacaggaggtgttggtcct
gcagtcagtgtttgcatgttcacattccacaacacttatgacggaatcaattgcctggat
ttctccgacgataatatgctcgttgcagctggtatgcaggagtcgtatattcgtgtttgg
agcatggatggcaagaaaatccaaacgacctacgacaacgtggatgatgcgcctccctcg
aactcgcgtcgtctgattggacactcgggtccggtttatgcagtcgcatttgcaccttct
gccacacgctcagagggcgctgtagcgccgaccaacgcccgttggctgctctcttcgtct
gcagacaagaccatccgactctggtctcttgatctatggcaatgcatggtcgtctacaag
ggccatgatcagcctgtttgggatcttcagtggggccctttcggtcactactttgtttcc
ggcggacatgacaagacagctcgtctctgggttacagaccatattcgtcagcagcgcatt
ttcgtcggccatgaccaggacgtggactgcgtctgcttccacccgaattccgcctacgtc
ttcactggcagctccgaccatacggtccgcatgtgggcggtcaccaccggtaacgctgtg
cggatgttcactggtcacaccggcaatattacggccttggcctgcagcagagacggcaaa
cttcttgcatccgcagacgatcaaggatccatcctcttgtgggatctggcacccggaagg
ttgttgaagcgcatgcgcggtcatggaaaaggaggaatctggtcccttagctggagcgtt
gagtcgactgtcctggtctctggcggtgccgacggcactgtccgcgtgtgggatgtcacc
ggcccagcccaagatccgtcccaaggtcgcgtagtcggcgaaggcggagcaggcacaaag
gtcgatgctggcaacccctcagccgcttccacccaaccctcgacctcggttgctccggga
atgggcaagaagaaaggaaaggatgtcgttgtcacacctgaccagatcagcgccttcccg
acgaagaagagtccggtctacaaagtcaagttcaccaacatgaatctgatcatcgccggc
ggggcctatcttccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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