KEGG T04524: ERS450000

Nocardia farcinica NCTC11134: ERS450000_00902

Entry

ERS450000_00902   CDS       T04524

Symbol

pafA

Name

(GenBank) Pup--protein ligase

K13571

proteasome accessory factor A [EC:6.3.1.19]

Organism

nfr Nocardia farcinica NCTC11134

Brite

KEGG Orthology (KO) [BR:nfr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:nfr03051]
    ERS450000_00902 (pafA)
Enzymes [BR:nfr01000]
6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.1  Acid-D-ammonia (or amine) ligases (amide synthases)
    6.3.1.19  prokaryotic ubiquitin-like protein ligase
     ERS450000_00902 (pafA)
Proteasome [BR:nfr03051]
Prokaryotic proteasome
  Bacterial regulatory particles
   ERS450000_00902 (pafA)

SSDB

Motif

Pfam:

Pup_ligase DUF244

Other DBs

NCBI-ProteinID:

CRY74741

UniProt:

A0A0H5NXF0

Position

1:888035..889378

AA seq 447 aa
MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLHQLVTHDRAGERVLEELLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
FLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGTAALVLEMIEAGVAFRDFAL
DNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYYARAVEHLRNRDRDPQIDQVVDL
WGRALDAVEAQDFAKVDTEIDWVIKRKLFQRYQDRYDMELSDPKIAQLDLAYHDIKRGRG
VFDLLQRKGLAKRITEDEAVDAAVDTPPQTTRAKLRGDFITAAQEAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVDRLIASM

NT seq 1344 nt +upstreamnt +downstreamnt
atggggatcgagaccgagttcggtgtgacatgcaccttccacggtcaccgtcggctgtcc
cccgacgaagttgcccggtacctgttccgccgggtggtgtcctggggccgtagctcgaac
gtgttcctccgcaacggtgctcgcctctacctcgacgtcggctcgcatcccgagtacgcc
accgccgagtgcgacagcctgcaccagctggtcacccacgatcgcgccggtgagcgggtg
ctcgaggagctgctcatcgacgccgagcagcggctggccgaggagggtatcggcggcgac
atctacctgttcaagaacaacaccgactcggcgggcaactcctacggctgccacgagaac
ttcctggtggtgcgggccggcgagttctcccggatctccgacgtgctgctgccgttcctg
gtcacccgccagctgatctgcggcgcgggaaaggtgttgcagaccccgaaggcggccacg
ttctgcctgtcgcagcgcgccgagcacatctgggagggcgtctcctcggcgaccacccgc
tcgcgcccgatcatcaacacccgcgacgagccgcacgccgacgccgagaagtaccggcgc
ctgcacgtcatcgtcggcgactccaacatgtccgagaccaccaccatgctcaaggtgggc
acggcggcgctggtgctggagatgatcgaggcgggcgtggccttccgcgacttcgccctc
gacaacccgatccgcgccatccgcgaggtcagccacgacctcaccggccgccgcccggtg
cggttggcgggcggccgccaggccagcgccctcgacatccagcgcgagtactacgcgcgc
gccgtcgagcacctgcgcaaccgcgaccgcgatccgcagatcgaccaggtcgtcgacctg
tgggggcgcgccttggacgcggtggaggcgcaggacttcgccaaggtcgacaccgagatc
gactgggtgatcaagcgcaagctgttccagcgctaccaggaccgctacgacatggagctg
tccgatcccaagatcgcccagctggacctggcctaccacgacatcaagcgcggtcgcggc
gtgttcgacctgctgcagcgcaagggcctggccaagcggatcaccgaggacgaggcggtc
gacgcggccgtggacaccccgccccagacgaccagggccaagctgcgcggtgacttcatc
accgccgcgcaggaggcgggccgcgacttcaccgtcgactgggtgcacctcaagctgaac
gatcaggcccagcgcaccgtgctgtgcaaggatccgttccgctcggtcgacgagcgggtg
gaccggctgatcgcctcgatgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

Download RDF

DBGET integrated database retrieval system