KEGG   Nocardia farcinica NCTC11134: ERS450000_03185
Entry
ERS450000_03185   CDS       T04524                                 
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
nfr  Nocardia farcinica NCTC11134
Pathway
nfr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ERS450000_03185 (exoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nfr03400]
    ERS450000_03185 (exoA)
Enzymes [BR:nfr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     ERS450000_03185 (exoA)
DNA repair and recombination proteins [BR:nfr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     ERS450000_03185 (exoA)
SSDB
Motif
Pfam: Exo_endo_phos DUF6207
Other DBs
NCBI-ProteinID: CRY78922
UniProt: A0A0H5NTW8
Position
1:complement(3286088..3286867)
AA seq 259 aa
MPNIVATINVNGVRAAAGKGMLAWLAATEADIVCLQETRATDEQTAAALAPALADGWQLA
HAEPGAKGRAGVGILSRRAPDAVRIGFGSSEFDGSGRYLEADFGDVTVASVYVHSGDAGT
PRQDEKYRFMTEFGAYLKARTGDFVVCGDWNIAHTERDLKNWKGNRKSAGFLPEERAWID
ELLAAGYVDVVRALHPDVDGPYSWWSYRGRAFDNDSGWRIDYHLARGELAGRAKQAVVER
APSYDQRWSDHAPVTVQYR
NT seq 780 nt   +upstreamnt  +downstreamnt
gtgccgaacatcgtcgcaacgatcaacgtcaacggggtcagggccgccgcgggcaagggg
atgctcgcgtggctggccgccaccgaggccgacatcgtctgcctgcaggagacccgcgcc
accgacgagcagaccgcggccgcgctggcgcccgcgctcgcggacggatggcagctggcc
cacgccgagcccggcgcgaaggggcgcgccggggtcgggatcctgtcgcggcgggcaccg
gacgcggtgcgaatcgggttcggcagcagcgagttcgacggctcgggccgctatctcgaa
gccgatttcggggatgtgaccgtggccagcgtctacgtgcactccggtgatgcgggtacg
ccacggcaggacgagaagtaccgcttcatgacggaattcggcgcgtacctgaaggcccgc
accggcgatttcgtggtgtgcggcgactggaacatcgcccacaccgaacgggacctcaag
aactggaagggcaatcgcaagtccgccggattcctccccgaggaacgcgcctggatcgac
gaactgctcgccgcgggctatgtcgacgtcgtccgcgccctgcaccccgacgtcgacggc
ccctacagctggtggtcctaccgcggccgtgccttcgacaacgactccggctggcgcatc
gactaccacctcgcccgcggcgaactggccggccgcgccaaacaggccgtggtcgagcgc
gccccgtcctacgaccagcgctggtccgaccacgcacccgtcaccgtccagtatcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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