KEGG   Nothobranchius furzeri (turquoise killifish): 107379145
Entry
107379145         CDS       T05163                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013  Nucleocytoplasmic transport
nfu03015  mRNA surveillance pathway
nfu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107379145 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    107379145 (rbm8a)
   03015 mRNA surveillance pathway
    107379145 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfu03019]
    107379145 (rbm8a)
   03041 Spliceosome [BR:nfu03041]
    107379145 (rbm8a)
Messenger RNA biogenesis [BR:nfu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107379145 (rbm8a)
Spliceosome [BR:nfu03041]
 Complex C
  Other components
   EJC/TREX
    107379145 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 107379145
NCBI-ProteinID: XP_015805233
UniProt: A0A1A7Z856
Position
sgr05:complement(48022939..48032141)
AA seq 175 aa
MADVLDLHEAGGEDFPMDEDGDDSIHKLKEKAKKRKGRGFGLEEGARSRAKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDLMGQTISVDWAFVRGPPKNKRRGGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggacgtactggaccttcatgaggcgggaggcgaagactttcctatggatgaggat
ggtgatgacagcatccacaagctgaaagagaaggccaagaagagaaaaggacgaggcttt
ggtttagaggagggagccaggtccagagctaaagaggactatgatacagtggaacaagac
ggggatgagccaggtcctcagagatctgtggagggctggatcctgtttgtgaccggtgta
cacgaggaagccactgaggaagacattcatgacaagttttcagagtttggagaaatcaaa
aacctgcatctcaaccttgatcgtagaacaggctatctgaagggctatgcgctggtggag
tatgagacatacaaagaggcacaggcagccatggaaggtctcaatggtcaggatctgatg
ggccagactatcagtgtcgactgggcgtttgtcagaggcccccccaagaacaaaaggagg
ggtggtgggcgacgacgtagcaggagtccagacaggagacggcgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (235)   
   KEGG ORTHOLOGY (1)   
   RefGene (231)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (256)   

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