KEGG   Nothobranchius furzeri (turquoise killifish): 107380143
Entry
107380143         CDS       T05163                                 
Symbol
actn4
Name
(RefSeq) alpha-actinin-4 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510  Focal adhesion
nfu04520  Adherens junction
nfu04530  Tight junction
nfu04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107380143 (actn4)
   04520 Adherens junction
    107380143 (actn4)
   04530 Tight junction
    107380143 (actn4)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    107380143 (actn4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nfu04131]
    107380143 (actn4)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:nfu04812]
    107380143 (actn4)
   04147 Exosome [BR:nfu04147]
    107380143 (actn4)
Membrane trafficking [BR:nfu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    107380143 (actn4)
Cytoskeleton proteins [BR:nfu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     107380143 (actn4)
Exosome [BR:nfu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107380143 (actn4)
  Exosomal proteins of colorectal cancer cells
   107380143 (actn4)
  Exosomal proteins of bladder cancer cells
   107380143 (actn4)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 XisI CAMSAP_CH DUF2875_C
Other DBs
NCBI-GeneID: 107380143
NCBI-ProteinID: XP_015806723
Position
sgr06:15483322..15561248
AA seq 899 aa
MVDYHASNNQQSAGEVNAYMEQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIE
NIEQDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAE
EIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISW
KDGLAFNALIHRHRPDLIDYDSLRKDDPVTNLNNAFEVAEKHLDIPKMLDAEDIVNTARP
DEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQMMEDYEKLASDLLEWIRRT
IPWLEDRTQEKTVNDMQAKQEDFRDYRTVHKPPKVQEKCQLEISFNTLQTKLRLSNRPAF
MPSEGRMVSDINSAWHTLEGAEKGYEEWILSEIRRLERLEHLAEKFHQKAAIHESWTDGK
EAMLTQKDYETSTLSEVKALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDAASVN
ARCQKICDQWDTLGTLTHNRKDSLERTEKQLESIDELYLEYAKRAAPFNNWMEGAMEDLQ
DMFIVHNIDEIQGLITAHEQFKATLPEANKEREAIQSIQAEVQKIAQSNGIKLSGANPYT
TITPESIDNKWEKAMAMVPQRDKALQGELNKQNSNDTLRATFATQANAVGAYIQAKMEEI
GRISIEMNGTLEDQLTHLKEYQQTIMSYMPEINKLEGHHQHIQEALIFDNQYTSYTMEHL
RVGWEQLLTTIARTINEVENQILTRDAKGISQEQLYEYRASFNHFDKDRGGALQPEEFKA
CLISLGYDVENDKTGDGEFNRIMGIVDPNGTGSVTFQAFIDFMSTETTDTDSADQVIASF
KILAGDKNFITAEELRRELPPDQAEYCIARMAPYTGPDAAPGALDYMSFSTALYGESDL
NT seq 2700 nt   +upstreamnt  +downstreamnt
atggtagattatcacgcttccaataaccagcagtccgctggcgaggtgaacgcctacatg
gagcaggagaatgactgggaccgggacctgctgctggaccctgcctgggagaaacaacag
aggaagacgtttacggcgtggtgcaactcccacctgaggaaggctggtacgcagatcgaa
aacatcgagcaggacttcagagatggactaaaactcatgctgctgctggaggtcatctca
ggcgagcggttacccaaaccagagcgaggcaagatgagggtccacaagatcaacaatgtg
aacaaagctttggattttattgccagcaagggagtcaagctggtgtctattggagcagaa
gaaatcgttgatgggaatgccaagatgaccctaggaatgatctggaccatcatcctccgc
tttgccatccaagacatctcggttgaagagacctccgccaaggagggtcttcttctgtgg
tgccagagaaagactgctccatacaagaacgtcaatgtgcagaacttccacatcagttgg
aaggacggtctcgccttcaacgctctgatccacagacacagacccgatctcatcgactac
gacagtctcagaaaggatgatcccgtaactaacctaaacaatgcctttgaggtggctgag
aagcacctggacatccctaaaatgttggatgctgaagacattgtgaacactgctcgtcca
gatgagaaagccataatgacttatgtgtccagtttctaccatgcgttctctggagcacag
aaggctgagacggccgcaaatcgtatctgcaaagttctggctgtcaaccaggagaacgag
cagatgatggaggactacgaaaagctggcgagtgatctgctggagtggattcgtcggaca
atcccctggctggaggacagaacccaagagaagaccgtaaatgatatgcaggcaaaacag
gaggacttcagagactaccgcacagtgcacaaaccacccaaggttcaggagaaatgtcag
ctggagatcagcttcaacactctgcagactaaactgagactcagcaacagaccagccttc
atgccatcagaaggacgcatggtgtctgacatcaactcggcgtggcacactttggaggga
gcagaaaagggctacgaggagtggatccttagtgaaatcagacgtctggagagactggag
catctggcagagaagtttcaccaaaaggcagccatccatgagtcctggacggatggtaaa
gaggccatgttgacacaaaaagactacgagacctccaccctgtcagaagtgaaggcgttg
ctacggaaacacgaggcctttgagagcgacctggctgcccatcaggacagagtggagcag
attgctgctatcgcgcaggaactcaatgaactggattactacgacgccgccagcgtcaat
gcccgctgtcagaagatctgtgaccagtgggacactctgggaactctgacccacaaccgc
aaagactcactggagagaacagagaagcagctagagtcgatagatgagctctacctagag
tacgccaagagagcagcgcctttcaacaactggatggagggagccatggaggacctgcag
gatatgttcatcgttcataacattgatgaaatccagggtctgatcacggcccacgagcag
ttcaaagccaccctgcctgaggccaacaaggagcgcgaggccatccagtccatccaagct
gaggtgcagaagatcgcccagagcaacggcatcaaactgagcggagccaacccctacacc
accatcacacccgagagcatcgacaacaaatgggaaaaggcgatggccatggtgccacaa
cgagataaagccctgcagggagagctgaacaaacagaactccaacgacaccctgagagcc
acattcgccactcaggccaacgctgtcggcgcctacattcaggccaagatggaggagatt
ggcaggatatccattgagatgaacggcactcttgaggatcagctgacccacctgaaggag
taccagcagaccatcatgtcctacatgcctgagatcaacaagctggagggacaccatcag
cacatccaggaggccctcatcttcgacaaccagtacacgtcctacaccatggagcacctc
cgtgttggttgggagcagctgctgaccacgattgccagaaccatcaacgaggtggagaac
cagatcctgacacgtgacgccaagggaatcagccaggagcagctgtacgagtaccgtgcc
tccttcaaccactttgataaggatcgcggcggggctctgcagcctgaggagttcaaggcc
tgtttgatcagtttgggctacgatgtggagaacgacaagacgggtgatggagagtttaat
cgcatcatgggaatcgtggaccccaatggcaccggcagcgtcaccttccaggccttcatc
gacttcatgtccacggaaacgacagacacggacagcgccgatcaggtcatcgcctccttc
aagatcctggctggtgataagaacttcatcactgcagaggagctgaggcgggagctcccc
ccagaccaggcggagtactgcatcgcccgcatggcgccctacacaggacccgacgccgct
cccggcgccctcgactatatgtccttctccaccgctctgtatggagagagtgacctgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (12)   
   RefSeq(nuc) (8)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (94)   

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