KEGG   Nothobranchius furzeri (turquoise killifish): 107380385
Entry
107380385         CDS       T05163                                 
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
  KO
K12856  pre-mRNA-processing factor 8
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107380385 (prpf8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nfu03041]
    107380385 (prpf8)
Spliceosome [BR:nfu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    107380385 (prpf8)
 Complex C
   U5 SnRNP specific factors
    107380385 (prpf8)
SSDB
Motif
Pfam: PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB
Other DBs
NCBI-GeneID: 107380385
NCBI-ProteinID: XP_015807108
UniProt: A0A1A7Z882
Position
sgr06:27063317..27077972
AA seq 2353 aa
MAGVFPYRGVLPGMPPGVPPVVPPVVPPGVPLVVPPAPVPDYMTEEKLQEKARKWQQLQA
KRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKL
LENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYISQWGTMWIMMRREKRDRRHFK
RMRFPPFDDEEPPLDYADNILDVEPLEAIQMELDSEEDSPVVDWFYEHQPLKDSSKFVNG
TTYRRWQFTLPMMSTLYRLANQLMTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPL
VRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKT
EDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGI
ALLWAPRPFNLRSGRTRRAIDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHR
PPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNF
NLKPVKTLTTKERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIF
AHVGQLTGMYRYKYKLMRQIRMCKDLKHLVYYRFNTGPVGKGPGCGFWAPGWRVWLFFMR
GITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIK
QNKARTILQHLSESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIR
RGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRF
SPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIK
RHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKP
ADTEPPPLLVYKWCQGINNLQDVWETAEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVD
HNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMA
GPPQMPNDFLSFQDTPTESAHPIRLYCRYIDRVHIFFRFSADEARDLIQRYLTEHPDPNN
ENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDN
PNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEITKERTAQCFLRVDDESMQRFHN
RVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIG
LNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEED
QLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTL
FQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVE
GILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTI
NRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELD
ALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWI
DIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGS
KPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDD
TNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTA
EEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKF
GDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTIT
EPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQ
RQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAAN
LHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEI
RCIVMVPQWGTHQTVHLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMAD
NPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQML
LSDRFLGFFMVPGQVSWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQE
GEIYNADREDMYA
NT seq 7062 nt   +upstreamnt  +downstreamnt
atggcaggagtctttccctacagaggggtccttcctgggatgccaccgggtgtgcctcct
gttgtacccccggttgtccccccaggtgttcccctggttgttcctcctgcaccagttcca
gactacatgacggaggaaaaactacaggaaaaggcaaggaaatggcagcagctacaggcc
aagcgttatgctgaaaagagaaagtttggctttgtggacgcccagaaggaagacatgcct
cctgaacatgttcgcaaaatcattagggaccatggcgacatgaccaacagaaagttccgc
cacgacaaaagagtttacctaggtgcactcaagtacatgccccacgcggtcctgaagctg
ctggaaaacatgccaatgccctgggaacaaatccgagacgtgcctgtgctctaccacatc
acgggagccatttcctttgtgaacgaaatcccttgggttatagagccggtctacatttct
cagtggggcaccatgtggatcatgatgcgtcgtgagaagcgtgatcgacgacacttcaaa
aggatgcgcttccccccattcgatgatgaggagccgccgctggactacgctgataacatc
cttgatgtggaacctctggaggccatccaaatggagcttgattcagaggaggactctcct
gtggtggactggttctacgaacaccagcccctcaaagacagttccaagtttgtgaacgga
accacgtatcgtcgctggcagttcacgctgcccatgatgtcaacgctgtatcgtctggcc
aatcagctaatgacagacctggtggactttaactacttttacctgtttgacctgaaggcc
ttcttcacttcaaaggccttaaacatggccatcccaggaggaccaaagtttgagccgctg
gtcagagacataaacctccaggatgaagactggaacgagttcaatgacatcaataaaatc
atcatccgacagccaatcagaacggagtacaagatcgctttcccctacctgtacaataac
ctgccacaccacgttcacctcacgtggtaccacacaccgaatgtggtgtttatcaagacg
gaggacccggatcttcctgctttctactttgacccactgatcaaccccatttctcacaga
cattctgtcaagagtcaagagcccctccctgatgacgacgaggagtttgagcttcctgag
tatgtggagcccttcctcaaagagacgcctctctacactgacaacacagccaatggcatc
gctctactttgggctccaaggcccttcaacctccgctctggccgcacgagacgtgccatc
gatatccctctggtcaaaaactggtaccgagagcattgccctgcaggacagccagttaaa
gtgcgtgtttcataccaaaaactactgaagtattatgtcctcaacgctctcaaacacaga
ccacccaaggctcagaagaagaggtatctgttccgctccttcaaagctacaaagttcttc
cagtccaccaagctggattgggtggaggtcggcctgcaggtgtgcagacagggctacaac
atgctcaatctgctaattcaccgtaagaacctcaactacctgcatctggactacaacttt
aacctgaagcctgtcaagaccctgaccaccaaggagcgaaagaagtccaggtttggaaac
gccttccacctgtgcagagaagttctgcgtctcagcaagctggtggtggacagccacgtt
cagtacagactggggaatgttgatgccttccagttggctgatgggctgcagtacatcttc
gcccacgtgggacagctgactgggatgtaccgctacaagtacaagctgatgaggcagatc
cggatgtgtaaagacttgaagcatcttgtctactaccgcttcaacacaggtcctgttggc
aaaggtccaggttgtgggttctgggctccgggatggagagtgtggctcttcttcatgaga
ggaatcactccgctgctggagaggtggctcggcaatctgctggccaggcagtttgaagga
cgtcactcaaagggcgtggccaagaccgtaaccaaacagcgcgtggagtcccactttgac
ctggagctgcgagctgctgttatgcacgacatcctggacatgatgcctgagggtatcaaa
cagaacaaggccagaaccatcttgcagcacctgagtgagtcctggagatgctggaaagca
aacattccttggaaggtgcccggtctcccgactcccattgagaacatgatcctgcgttac
gtgaaggccaaagccgactggtggacaaacacggctcactacaatcgtgagcgaattcgc
cgtggagccactgtggacaagactgtgtgcaagaagaacctgggcagactgacccgtctg
tacctgaaagctgagcaggagaggcagcacaactatctgaaggatggtccctacatcaca
gcagaagaggccgtggccatctacaccaccacggtgcactggctggagagccggcggttc
tcccccattcccttccctcctctgtcctacaaacacgacaccaagctgttgatcctggcc
ctggagaggctcaaggaggcctacagtgtgaagtctcgtctgaaccagagtcagagggaa
gaactgggtctgatcgagcaggcctatgacaacccccacgaggcgctttccaggataaaa
cgtcatttactcactcagagagcgttcaaggaggttggtattgagttcatggacctgtac
agccacctggtgcccgtgtacgacgtggaacctttggagaagatcaccgacgcctacctg
gaccagtacctgtggtacgaagcagacaagagacgtcttttccctccgtggatcaaacct
gccgacacagaaccgccaccgctgctggtctacaagtggtgccagggcatcaacaacttg
caggatgtgtgggaaacagcggagggagagtgcaacgtgatgctagagtctcgctttgag
aagatgtacgagaagatcgatctaacgttgctcaacaggctgctccgtctcattgttgac
cacaacattgctgattacatgacggccaagaacaacgtggtgataaactacaaggacatg
aaccacaccaactcctacggcatcatcagggggctccagtttgcttcgttcatcgttcag
tattacggtctggtgatggacctgctggtgctcggcttgcaccgcgccagtgagatggcc
ggtccgcctcagatgcccaacgacttcctcagtttccaagacacgcccacagagtctgcc
catcccatcaggctgtactgtcgttacatcgaccgcgtacacatcttcttcaggttctct
gctgatgaagccagagatctaattcagcgttacctgacagagcatccagatcccaacaat
gagaacatagtgggctacaacaacaagaagtgctggccgcgggacgcccgcatgaggctg
atgaagcatgatgtcaatcttgggcgagccgtgttctgggacatcaaaaaccgcctccca
agatctgtgaccacggtccagtgggagaacagctttgtgtcggtctacagcaaagacaac
cccaacctgctcttcaatatgtgcggctttgagtgtcgcatcctccccaagtgtcgcacc
agctacgaagagttcactcacaaagatggagtctggaacctgcagaatgagataactaaa
gagaggacagcgcagtgcttcctgcgtgtggatgatgaatcgatgcagcggttccacaac
agagtgcgtcagatcctgatggcttctggatccaccactttcaccaagattgtaaacaag
tggaacaccgctctgatcggcctgatgacgtacttccgtgaggctgtggtcaacacacag
gagctcctggatctgttggtgaagtgtgagaacaagattcagacacgtatcaagatcggc
ctcaactccaagatgcccagtcgtttccctcctgtcgtcttctacacccccaaagaactg
ggaggtctcggcatgctgtccatgggtcacgtactcatcccgcagtcggacctgcggtgg
tccaagcagacagatgtgggcatcacccacttcaggtctggaatgagccacgaggaagac
cagctcattcctaacttgtatcgttacatccagccgtgggagagtgagttcatcgactct
cagagagtctgggcagagtacgccctcaagaggcaggaggccatcgcccagaacaggcgt
ctcaccctggaggatctggaggactcgtgggacagaggaattccccggatcaacaccctt
ttccagaaggacagacacactctggcctatgacaaaggctggagagtcaggactgatttc
aaacagtatcaggtgctgaagcagaatccattctggtggactcaccagagacatgatggg
aaactgtggaacctgaacaactaccgcacagacatgatccaagctctgggtggtgtggag
ggcatcctggaacacacgctcttcaaaggcacctacttccccacctgggagggtctcttc
tgggaaaaggccagtggctttgaagagtccatgaaatggaagaagctgaccaacgctcag
aggtctggtctcaaccagatccccaaccgtcgcttcactctctggtggtcgcccaccatc
aaccgggccaacgtgtatgtgggtttccaggtacagcttgacttgacgggaatcttcatg
cacggcaagattcccactctgaagatctccctcattcagatcttcagggctcacctgtgg
cagaagatccatgagagcatcgtcatggatctctgtcaggtgtttgaccaggagctggat
gctttggagattgagacggtgcagaaggagaccatccatcccagaaagtcctacaagatg
aactcgtcctgtgcagacatcctcctctttgcgtcatacaagtggaacgtctcccgaccg
tctctgctcgccgactcaaaggatgtgatggacagcaccaccacacagaaatactggatt
gatatccagctccgatggggagactacgactctcatgacattgagcgctacgccagagcc
aaattcctggactacaccacggacaacatgagtatctacccctctcccactggagtgctc
atcgctatcgacctggcttacaaccttcacagcgcgtatggtaactggtttccaggaagc
aagcctctgatccagcaggccatggccaagatcatgaaggccaaccctgctctgtatgtg
ctccgagagcgcatccgcaaaggtctgcagctctactcctcagagcccacggagccttac
ctgtcctcgcagaactacggcgagctcttctccaaccagatcatctggtttgtggatgac
accaatgtctacagagtcaccattcacaagacctttgagggaaacttgaccacaaaaccc
atcaatggagccattttcatcttcaaccccagaactggacaactcttcctcaagatcatt
cacacgtctgtgtgggctggacagaaacgtctgggacagctggccaaatggaaaacggct
gaagaagttgctgccctgattcgctccctccctgtggaggagcagcccaagcagatcatc
gtaaccaggaagggcatgctggaccctctggaggtccacttgcttgacttccccaacatc
gtgatcaaaggctcagagctgcagctgcctttccaggcctgtctgaaggtggagaagttt
ggagacctgatcttgaaggcgacagaaccacagatggtcctgtttaatctctatgatgat
tggctgaagaccatctcgtcctacaccgccttctcccgtctcatcctgatcctcagagcc
ctccacgtcaataatgaccgcgccaaggtcattctgaagcctgataagaccaccatcact
gagccccatcacatctggcccacgctgactgatgaagagtggatcaaggtggaagtgcaa
ctcaaagatctcattctggccgattatggcaaaaagaacaacgtgaacgtggcctctctg
acccagtcggagatccgtgacatcatcctgggtatggagatctctgcgccgtcgcagcag
cgtcagcaaatcgcagagatagaaaaacagaccaaagagcagtcacagctcaccgccacg
cagacccgcaccgtcaacaagcacggagacgagatcatcacctccaccacctccaactac
gagactcagaccttctcctccaagactgagtggagagtcagggccatatctgctgccaac
ctccatctccgaaccaaccacatctatgtgtcatctgatgacatcaaggagaccggttac
acctacattctgcccaaaaacgttctcaagaagttcatctgcatctcagatcttcgggca
caaattgcaggttacctgtatggcaccagccccccggataacccccaggtgaaggagatc
cgttgtatcgtcatggtacctcagtgggggactcatcagaccgttcacctgcccaaccag
ctacctggtcatgaatatctcaaagaaatggagccccttggctggatccacacgcagcct
aacgagtccccacagctgtctcctcaggacgtcaccacccacgctaagatcatggctgat
aacccctcatgggatggagaaaagaccatcataatcacttgcagcttcacgcctggctca
tgcacactcacggcctacaagctgacccccagtggatatgagtggggtcgccagaacacc
gacaagggcaacaaccctaaaggttacctaccatctcattatgagagggtgcagatgctg
ctctctgaccgcttcttgggcttcttcatggttcctggacaagtctcatggaactacaac
ttcatgggtgtgcgccacgatcccaacatgaagtacgacctgcagttggccaaccccaaa
gagttctaccatgaagtccatcggccctcacacttcctaaactttgcctcgctgcaggag
ggtgaaatttacaacgccgaccgagaagacatgtacgcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (297)   
   KEGG ORTHOLOGY (1)   
   RefGene (293)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (318)   

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