KEGG   Nothobranchius furzeri (turquoise killifish): 107383004
Entry
107383004         CDS       T05163                                 
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
  KO
K14307  nucleoporin p58/p45
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107383004 (nup58)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfu03019]
    107383004 (nup58)
Messenger RNA biogenesis [BR:nfu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107383004 (nup58)
SSDB
Motif
Pfam: Nucleoporin_FG2 Siah-Interact_N Nup49_C PSY3 FapA Tox-ODYAM1 PHM7_cyt Dynactin_p22
Other DBs
NCBI-GeneID: 107383004
NCBI-ProteinID: XP_015810885
UniProt: A0A1A8B0I0
Position
sgr08:49663538..49681087
AA seq 596 aa
MSGFNFGSGTLGATNTGGGFSFGAVTSAPAANTSGFSFGTVLGTAAAAPAPTTATSTTAS
LGLGGSIFGQKPAGGFSFNTPASSASAPTTGLAIGIPATTAATTGFSLAFNKPTASATPF
SLTTSTSSSTVGAGLSFGSVLTSTAPQQPSATGFSLGLGGITTASAASTVPSLGTGLFSS
TGASGLGQTTLGGGALGSLLATSTAVPAAPSPSIGLGGVDFSTLSENKSDALSGTNAQDS
KALKDENLPTCICQDVDNFQKFVKEQKQVQEDISRMSSKSISKVQDDIKSLKQLLSVCAS
GLQRQALAIDKLKLETAQELKNADIALRTQKTPPGLQHENTAPSDYFRGLVDQFEVQLQQ
YRQQIEELENHLTTQSSGTHITPQDLTMAMQKLYQTFVAQAAQLQSVHENVKILKHQYLS
YRRAFLEDSTDIFESKRASNRKWQSSPRVTTGPAPFSSVPNAAAVAMAATLTQQQQPTPG
TQAPLGAGFGNPFASAVGTNLGSSTLGGFGGGPGFGGVGTGGSSFAFSSTSKPTGGSLSA
GFGSSSNSGFYFSNPGINQSAGLTFGVSNQPAAGFGTGTPFLQLKKPPAGNKRGKR
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgtctggctttaactttggatcgggaacgcttggagctaccaacacgggtggaggattt
tcatttggagccgttaccagtgcccctgcagccaatacgagcggcttttcctttgggact
gttctgggaacagcagctgcagcccctgctccaaccactgccacctccaccactgcttct
ctcggactgggaggcagcatctttggccagaaacctgctggaggattctctttcaatacg
ccagcttcaagtgcttctgcgcccaccacaggcctcgcaataggcattccagctacaaca
gctgctaccactggctttagtttagccttcaacaagcccactgcctcagcgacacccttt
tccctcaccaccagcaccagttcctcgacagtgggagcaggtttatcatttggctccgtc
ctgacatccacagcaccacagcagccctcagccactggcttcagccttggtctcggtggc
atcacaaccgcctcagcagcctcaacagtgccatcactgggcactggacttttctccagc
actggagcctcagggctgggccagactactcttggaggaggagccttgggttctttgctg
gccacctccacagcagtaccagctgctccttctccaagcattggcctgggtggggttgac
ttcagcaccctctccgagaacaagagcgatgcattatctggaaccaatgctcaggacagc
aaagctctaaaagatgagaatctgcccacatgtatttgtcaagatgtagacaattttcaa
aaatttgtaaaagagcaaaagcaggttcaggaagacatcagtaggatgtcctcaaagtcc
atttctaaggttcaggatgacatcaaaagcctcaaacagctgctttctgtctgtgccagc
ggactgcagcgccaggctctggctatagacaaactcaagttggagacagctcaggagctg
aaaaatgcagacatagctctgcgcacccagaagacacctcctggccttcagcatgaaaac
actgctccgtcagattatttccgtggcttggttgaccagtttgaggtgcagctgcagcag
taccggcagcagatagaagagctggagaatcacctgaccacgcagagcagcggcacacac
atcacccctcaggatctgacgatggccatgcagaagttgtaccaaacatttgttgcacag
gctgcccagcttcagtctgtccatgagaacgttaagattttgaagcaccagtacctttcc
taccgaagagccttcctggaagactccacggacatctttgaatccaaacgggcgtctaac
aggaaatggcagagttcgccgcgagtcacaaccgggcccgcccccttctccagcgtaccc
aacgctgcagctgttgctatggcagccacgttgacccagcaacagcagccaactccaggg
acccaggcacccttgggggcagggtttggaaacccctttgcctcagcagtaggcactaac
ttgggctcttctacccttggaggttttggtggtgggccagggtttggtggggtagggact
ggggggtcttctttcgccttctcctctaccagtaagcccacaggaggcagtttgagtgca
ggtttcggtagcagtagcaactctggcttttacttcagcaaccccggcatcaaccagtcc
gctggcctgacctttggggtgtccaaccaaccggctgccggcttcggcacaggaacgccc
tttctccagctgaaaaagccccctgctgggaataaaaggggcaagagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system