KEGG   Nothobranchius furzeri (turquoise killifish): 107386450
Entry
107386450         CDS       T05163                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107386450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nfu03041]
    107386450
Spliceosome [BR:nfu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107386450
 Complex B
    107386450
SSDB
Motif
Pfam: Surp cwf21 CID RRM_1 CTK3 SET_assoc
Other DBs
NCBI-GeneID: 107386450
NCBI-ProteinID: XP_015816324
UniProt: A0A1A8U1P4
Position
sgr11:15589664..15600524
AA seq 880 aa
MSERKRKPSTPIKPLSKKEQEVLKKKEVEKAAEVFEEFVASFETSEKNKVKTFVRGGIVN
ATKEEEEAEVKKNKLYRPATKFVSVSHHVSPSASSESRKSAFKKKVDEKKKSNLELFKEE
LKLIQEEREERHKRKRGDSGVRREGGGHEDLDLSSLGRSMLYDDLAPVSTNLYINCISPK
MNEEMLCREFCKHGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERAMAALDGKVIM
GFEMKLGWGKPARIPPQPLYTPVGVRAAPPPPSGLPFNAQPRDRLRNDFTKPLGMSKTEL
NKTLSEAVVKVVIPTERNLLFLIHRMIEFVVREGPMFEAIIMNKEIKNPDYRFLFDCKSQ
DHVYYRWKLFSILQGESPTKWRTADFRMFRGGSVWRPPVLNTYSLRGDDGAEGMNTSPLE
EEEVKKGQLRAEHKQKLETLLEELTPSRDGIASAMMFCLERADAAEEVVGLVTDSFSVLP
TPLQKKISRLYLVSDLLHNSSAKVAGASYYRKYLETKLPQIFEFLNAAYKNIQARLQAEQ
FKQKVMNCFRAWEDWAIYPEPYLIRLQNIFLGFVKAGEEEAETVEDTSRELDGVLLDRTL
VDGLRLGRSPVDDIDGCPMGWDPLDGVPVDDLDGVPLATAIDDIDGIPLYESSNRLSGVP
LSKWEKTSDTGTFSHAKAESKWDTVGEQEDEDKVNVSSNSHEEDEDSESDSSADSSGAPN
YDSAVFQSSLKSFQVSESKRKRLREVEVKVMKFQDELESGKRPRKSGQSMQHQVEHYRNK
LLQKEFEKNEEKNERSKSKDGQKDDRRNREKSKRKDEGDRRRSSDTGEQARKSRSSSPIS
RKKSPKRSKRSRSPSPVLKSKKSRSRSPHRSHKKSKKSKH
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgtcggagagaaagagaaaaccatccactcctatcaaaccgctctccaaaaaagaacaa
gaagtgctgaagaagaaggaagtagagaaagcagcagaggtttttgaagagttcgtggca
tcgtttgagaccagtgagaaaaacaaggtgaagacttttgtgcgagggggtatagtgaat
gcaactaaagaggaggaagaagcagaagtgaaaaagaataagctgtaccgacctgccaca
aagtttgtctctgtgtctcaccatgtctcaccatcagcgtcgtcagaaagcagaaagtct
gcatttaagaaaaaggtggatgagaagaagaagagtaatcttgaacttttcaaagaagaa
cttaagctaatacaagaagagcgtgaggaaagacataaaagaaagaggggtgattctggt
gtaagaagagaaggtggaggacatgaagatctggatctatcctcactgggacgatcaatg
ttgtatgatgacttagccccagtttccaccaacctctacattaactgcattagtccaaag
atgaatgaagagatgctctgccgggagttttgtaaacatggccccctggccagcgtgaag
atcatgtggccccgaacagacgaagagcgttgcagaacttccaacagagcctttgtggcc
ttcatgacacgaaaagacgcagaaagggccatggctgctctggatggtaaagtgattatg
gggtttgaaatgaaactgggatggggcaaaccagcccgtattccacctcagcccctgtac
acaccagttggggtgagagctgcacccccgcccccatctggcctgcctttcaacgcccag
ccaagggatcgcttacgcaatgacttcacaaaacctctgggcatgtcgaaaacagagctc
aacaagactctgtccgaagccgtagtcaaagtggttatcccaaccgaaaggaatctgtta
ttcctcattcacagaatgatagagtttgtggtgcgtgaaggtcccatgtttgaagccata
ataatgaacaaagagataaaaaatccagattacaggtttctttttgactgtaaaagccaa
gatcacgtgtactatcgctggaagttgttctcaatcctccagggagagtctcccaccaag
tggaggacagccgatttccgtatgttcagaggaggctcagtatggagaccccctgtccta
aatacttactctttgagaggagatgatggagcagagggaatgaacacgtctcccttagag
gaggaggaggtgaagaagggtcagctcagagctgagcacaaacagaaactggagacactt
ctagaggagctgactcctagcagagacggtatcgccagtgccatgatgttctgcctggaa
cgagcagatgctgcagaagaagtagtgggactcgtcaccgactcgttttctgtgcttccg
acaccccttcagaagaagatctctaggttgtatctcgtctcagaccttctgcacaactct
agtgctaaagtagccggtgcatcatattatcgtaaatatcttgaaacaaagctaccgcag
atatttgagtttcttaatgccgcctataagaacatacaagcccggctgcaggccgagcag
tttaagcaaaaggtcatgaattgttttagagcgtgggaagactgggccatatatccagag
ccttatctaatccgccttcagaacatctttctgggcttcgtcaaagcaggagaagaggaa
gcagagacggtagaggatacgtcccgtgagcttgatggtgtgctgctggacagaaccctt
gtagatgggttacgactgggcagatctccagtggatgacatcgacggctgccccatgggc
tgggaccccctggatggggtacctgtagatgatctagatggtgttcctttggccactgct
atagatgacatagatggaatacccttgtatgagagcagtaaccgtctttctggggtgcct
ttgtctaaatgggagaaaaccagtgacactgggacattttctcatgccaaagccgagtcc
aagtgggacactgtgggcgagcaagaggatgaagataaagtgaatgttagcagcaactca
cacgaggaagacgaggactcggagagcgacagcagtgccgactcctccggtgcaccaaac
tatgacagtgcggttttccagagctccctcaaaagtttccaagtgtctgagagtaaaagg
aaaaggctgagggaggtagaggtaaaggtaatgaagttccaggatgagctggagtctggg
aaaaggccgaggaagtccggacagagcatgcagcatcaagtggagcactacagaaacaaa
ctgctacagaaggagtttgaaaagaacgaagaaaagaatgagagatcaaagtccaaagac
gggcagaaagatgacaggcggaacagagagaagagcaaaagaaaggatgaaggcgacaga
agacggagcagcgatactggagaacaagctcgaaaatcacggagcagctctcccataagc
aggaaaaagtctcccaaacggtccaaacgttcccgatcaccatccccagttctaaagtcc
aaaaagtccaggtcacggtcgccacatcgctcccataagaagtcgaagaagagtaaacac
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (52)   

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