KEGG   Nothobranchius furzeri (turquoise killifish): 107391830
Entry
107391830         CDS       T05163                                 
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4 isoform X1
  KO
K11131  H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107391830 (dkc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nfu03009]
    107391830 (dkc1)
   03032 DNA replication proteins [BR:nfu03032]
    107391830 (dkc1)
Ribosome biogenesis [BR:nfu03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    107391830 (dkc1)
 Prokaryotic type
    107391830 (dkc1)
DNA replication proteins [BR:nfu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    Dyskerin complex
     107391830 (dkc1)
SSDB
Motif
Pfam: DKCLD TruB_C_2 TruB_N PUA UPF0113
Other DBs
NCBI-GeneID: 107391830
NCBI-ProteinID: XP_015824771
UniProt: A0A1A8ULI7
Position
sgr16:complement(14820353..14828447)
AA seq 498 aa
MADEAASTKKKKKSKRVAEDVGEIQESQEFLIQPDTKVPTLDSSQWPLLLKNLHKLNILT
SHYTPIPSGSNPLKRNISDYVRSGFINLDKPANPSSHEVVAWIRRILRVEKTGHSGTLDP
KVTGCLIVCIDRATRLVKSQQSAGKEYVGIVRLHNAVESEHVLARALETLTGALFQRPPL
IAAVKRQLRVRTIYESKLIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQEL
RRVRSGVLGEKDNLVTMHDVLDAQWQFDHNKDETYLRRVIFPLEKLLVSYKRLMMKDSAV
NAICYGAKIMLPGVLRYEDGIEVNQDIVVITTKGEAICTAVALMTTAVISTCDHGVVAKI
KRVIMERDTYPRKWGLGPKACKKKMMIKQGLLDKHGKPNAQTPQDWKDDYADYSVTVKEE
PKDTPAKRKREATECDSETPETPSAEVKKEKKKKKKAEMEEEPEVKEEEPEVAEEPDTQV
ERKSKKKKKKLKEADASE
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggcggacgaagctgcatccacaaagaagaagaagaagtcgaagagagtggctgaagat
gttggggagatccaagagagtcaagagtttttaatccagccagacaccaaagtccccact
ttggactcctcccagtggcccttgttattaaagaatctccataagctgaacatccttaca
tctcattacacccccatacccagtggcagcaacccgctgaaaagaaacatcagcgactat
gtcaggtctggattcatcaacctggacaaaccagccaacccttcgtctcatgaggtggtg
gcgtggatccggaggatcctgcgagtggagaagacgggccacagcgggactctagaccca
aaggtcactggctgcctcatcgtctgcattgaccgagccaccagactagtgaagtcccag
cagagtgctggtaaggagtatgtgggaatcgttcggctgcacaacgcagtagagagtgaa
cacgtgctggcccgggccctggagaccttgaccggagctctattccagcgtcctcccctc
atcgctgcagtgaaacgtcagctgagagtccgaaccatctacgagagcaagctgatcgag
tacgacccagagcggaggctgggcatcttctgggtcagctgtgaagcaggaacttacatc
aggactttgtgtgtccacctgggacttttacttggagttggaggacagatgcaggaattg
aggagggtccggtctggagttctgggcgagaaggacaacttggtgacgatgcacgatgtt
ctcgatgctcagtggcaatttgatcacaataaagatgagacttatctgaggagagtcatc
ttccctctagaaaagctgctggtgtcatacaaacggctgatgatgaaggacagcgcggtg
aacgccatctgttacggtgccaagatcatgcttcctggtgtcctccggtacgaagacggc
atagaggttaaccaggacatcgttgtcataacaaccaaaggcgaggccatctgtacagcg
gtagcactgatgaccacagcagtgatctccacctgtgatcacggcgtcgtggcgaagatc
aagagggtgatcatggagagagacacgtatccacggaaatggggtctgggtccaaaggca
tgtaagaagaagatgatgatcaaacaaggactcctagacaaacacggaaagccaaacgcc
caaactcctcaggactggaaagacgactacgcagactacagtgttactgttaaggaagaa
ccaaaagacacccctgctaagagaaaacgggaggctacagagtgtgacagtgaaaccccg
gagactccttctgcagaggtaaagaaagaaaagaagaaaaagaaaaaagcagaaatggag
gaggagccagaagtgaaggaggaggagccagaagtggcggaggaacctgacacacaggtt
gaaagaaaatcaaaaaagaaaaagaaaaaactaaaggaagccgatgcgtcggagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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