KEGG   Nothobranchius furzeri (turquoise killifish): 107393399
Entry
107393399         CDS       T05163                                 
Symbol
clock
Name
(RefSeq) circadian locomoter output cycles protein kaput isoform X1
  KO
K02223  circadian locomoter output cycles kaput protein [EC:2.3.1.48]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nfu03000]
    107393399 (clock)
   03036 Chromosome and associated proteins [BR:nfu03036]
    107393399 (clock)
Enzymes [BR:nfu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     107393399 (clock)
Transcription factors [BR:nfu03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    107393399 (clock)
Chromosome and associated proteins [BR:nfu03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    107393399 (clock)
SSDB
Motif
Pfam: PAS_11 PAS_3 HLH PAS PAS_9
Other DBs
NCBI-GeneID: 107393399
NCBI-ProteinID: XP_015827206
UniProt: A0A1A8V9S5
Position
sgr17:complement(35814912..35845908)
AA seq 812 aa
MTSSIDRDDSSIFDGLIEEDEKDKAKRVSRNKSEKIRRDQFNVLIKELGTMLPGNTCKMD
KSTILQKSIDFLHKHKEIAAQSESTEIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMTDG
NIIYVSENVTSLLEHLPSDLVDQNLLNFLPMGEHSEVYRALSAQVREGEMLTPDYLKTRN
QLEFCCHMLRGTIDPKEPPVYEYVRFIGNFKSLKKVPNCTGNGFDGVIQRSLHSAFEDKV
CLVATVRLAKPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFI
VCTHTVVSYAEVRAEQRRELGIQESPPEIAVDKQSQGSGSESQLNASSLKEALERFNRSR
TPSASSRSSRKSSHTAVSDPASSQMKIQGDRSTPGRQSVSAVEMTSQRRSSVSSQQSISS
QNTGQNMVPSVVSQQQQQQIPTTQPVQYSGQLTAMQNLKEKLEERARTIETNIQRQQDEL
RQIQDQLQRVQGHSVQVFPQKGAGGVTAQMSQGSAGQQGGSLNVQGQVVSSGPVQNSTQQ
QPAIQPQQLKLRTEHGPALSQSQQTPLPGSLYNTMMIPQQNPANVVQISTTLAQNSRPCA
PAVATFAQDHSAQIRFPAGPQLLTKLVTGQMACGAVMVPTTMFMGQVVTAFAPQQGQTQA
INISQQQQQEAQSQLSAMQAGQAPLSQQQQFLQAPRLLHGNQSTQLILQAAFPLQQHSAF
AAAAQQQKPQRQQQLAPLRSDGLSDRSSSQPQ
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgacctcgagcattgaccgagatgacagcagcatttttgatgggttaatagaagaagat
gaaaaggacaaagcaaaacgtgtgtcccgtaacaagtctgagaagatacgcagagaccaa
ttcaatgtcctcattaaggagttgggtaccatgttgcctggcaacacatgcaaaatggac
aagtcaactattttgcagaaaagcatcgactttctacataaacacaaggaaattgctgct
cagtcagaatcaacagagatcagacaagactggaagcctccatttctcagtaatgaggag
ttcactcagctgatgttggaggctttagatgggttttttcttgcaattatgaccgatggt
aatataatctatgtgtctgagaatgtgacgtctcttctagaacatttaccttccgacctg
gtggatcagaacctgttgaactttttgccgatgggggagcattctgaagtctacagagct
ctgtccgctcaggtccgggagggggagatgctaacgcctgattacttaaaaacaagaaat
cagcttgagttctgttgccatatgctccgagggactatcgaccccaaagaacctcctgtg
tatgaatatgtcaggtttataggaaacttcaaatccctgaaaaaagtgcctaactgtacc
ggaaacgggtttgatggcgtgatccagcgatcgcttcactctgcctttgaggacaaagtt
tgtctcgttgcaactgtgaggctcgccaaaccacagtttatcaaggagatgtgcactgtt
gaggagccgaatgaggaattcacctccagacatagtttagagtggaaatttctcttcttg
gaccacagagctccacccatcataggttacctcccgtttgaggtcctgggtacttcagga
tacgactactaccatgtggatgacctggagaccctggccaagtgccacgaacacttgatg
cagtatggcaaaggaaagtcctgctattacagattcctcaccaaaggtcagcagtggatt
tggctgcagacccattactacatcacttatcaccagtggaactccagaccggagtttatt
gtctgcacacacacggttgtgagttacgctgaagtaagagcagagcagcgcagagagctc
gggattcaggagtcgccgccggagatcgccgtcgacaagcagagccaaggttcaggctct
gagtcccagctcaatgcatccagcctgaaagaagctttagagcgcttcaaccgcagcagg
accccctcagcctcatctcgcagctcacgcaagtcctcccatacggccgtgtctgacccc
gcctcatcacagatgaaaatacagggagacaggagcacgccgggtcgccagtctgtctct
gctgtggagatgacgtcacaacggaggtcttcagtcagcagtcagcagtcgataagttcc
caaaacacaggacagaacatggtgccttctgtggtttcacagcagcagcagcagcagatt
ccaaccacccaaccagtgcagtattctggccagctaacggccatgcagaacctgaaggag
aagctggaggagagagctcggacaatagaaacgaacattcagcgacagcaggatgagctg
cggcagatccaggatcagctgcagagggtgcagggacacagtgttcaggttttcccacag
aaaggagctggaggtgtgactgctcagatgtctcaggggagcgccgggcagcaggggggg
tctctgaacgttcagggtcaggtggtctcttcagggcctgtacagaacagcacacagcaa
cagccggccatccagccccagcagctaaaactcaggacagaacatggtccagcactctca
cagtctcaacaaactccccttcctggatcactctacaacactatgatgatcccacagcaa
aatccagctaatgtggttcagatttccacaaccctggcacaaaattccagaccctgcgct
cctgctgtggcaacatttgcacaggaccattctgctcagataaggtttcctgcaggtccc
cagctgctgactaaactagtgacaggacagatggcatgtggagcagtcatggttcccacc
accatgtttatgggtcaggtggtgacggcctttgctcctcagcagggccagacgcaggcc
atcaacatttcccagcagcagcagcaggaggcgcagtcacagctttcagccatgcaggcg
ggacaggcgccgctgagtcagcagcaacagtttctgcaggctcctcgtcttcttcatgga
aaccaatctacccagttgatcctacaagcagcgttccctttgcagcagcacagcgcgttt
gctgcagcagcccagcagcagaaaccgcagcggcagcaacaactggcccctctcagatca
gacggtttgtccgaccgctcttcttcacagccacagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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