KEGG   Candidatus Nitrososphaera gargensis: Ngar_c32520
Entry
Ngar_c32520       CDS       T02305                                 
Symbol
tfb10
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
nga  Candidatus Nitrososphaera gargensis
Pathway
nga03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Ngar_c32520 (tfb10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nga03021]
    Ngar_c32520 (tfb10)
Transcription machinery [BR:nga03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Ngar_c32520 (tfb10)
 Prokaryotic type
  Archaeal type
    TFB
     Ngar_c32520 (tfb10)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon zf-RRN7 OrfB_Zn_ribbon Trm112p Zn_Tnp_IS1595 Prim_Zn_Ribbon LysW-like_globular
Other DBs
NCBI-ProteinID: AFU60167
UniProt: K0IMD2
Position
2549755..2550648
AA seq 297 aa
MLIKSAGIICPNCGDGQKVTDVESGELICTKCGFVIRERVGNEEEDWSVLAREPGSKLRT
SPTSLARSGMGLSTIIGRPDMSAGSGLNAAMRSTFDRLRAWDFRIKGQDERSLRRAFVEL
DRLRSALGLSDAIVEKTAYIYRRAQERGLVRGRTMRAVLGAAIYIVQREMGVSGTLQDII
NATNTTEKDLARAYRILLRELDLKVPMLDPAKCVSRVASKANISERTKRKAMDMIYNVIK
SGLAAGKDPMGLAASVLYIACTSSGEPKSQAAIADAAGVSEVTLRKNQRMIIEQAAT
NT seq 894 nt   +upstreamnt  +downstreamnt
atgctaataaagtcggcgggcatcatatgcccaaactgcggcgacggccaaaaggtcacc
gatgtcgagtcgggcgagcttatctgcacaaagtgcggctttgtgatacgcgagcgcgta
ggcaatgaggaggaggactggagcgtccttgccagagagccgggcagcaaattgaggacc
agccccacttcgcttgcccgctctggcatgggcctctccacgattatcggcaggccggac
atgagcgccggcagcggcctcaacgcggccatgcgatcgacctttgaccgcctgcgggcg
tgggatttcaggataaaggggcaggacgagcggagcctcaggcgcgcatttgttgagctt
gacaggctgcggagcgcgctcgggctgtcagatgcgatagtcgaaaagaccgcctacatc
taccgccgggcgcaggagcgggggcttgtacggggcaggacgatgcgcgccgtgctgggt
gcggccatctacatcgtgcagagggagatgggcgtctctggcaccctgcaggacatcata
aacgcgacaaacacgacagaaaaggatcttgcaagggcctataggatactgttacgcgag
cttgacctgaaggtcccgatgcttgaccctgcaaagtgtgtctcccgtgtggcgagcaag
gccaacataagcgagcgcacaaagcggaaggcgatggacatgatctacaacgtcataaag
agcgggcttgcggcaggcaaggaccctatggggcttgcagcatcggtgctgtacatagcc
tgcacgagcagtggcgagccaaaaagccaggctgctatagcggacgcggccggcgtatca
gaagtgaccttgagaaagaaccagcgaatgattatcgagcaggcggctacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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