KEGG   Nannochloropsis gaditana: NGA_2047520
Entry
NGA_2047520       CDS       T02917                                 
Name
(RefSeq) trna pseudouridine synthase a
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ngd  Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ngd03016]
    NGA_2047520
Enzymes [BR:ngd01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     NGA_2047520
Transfer RNA biogenesis [BR:ngd03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    NGA_2047520
 Prokaryotic type
    NGA_2047520
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 17360842
NCBI-ProteinID: XP_005854069
UniProt: K8YUC8
Position
Unknown
AA seq 189 aa
VADVRLWNVSHAPPPREKNLAVQGDWHAMYNSRSKLYTYRFSTRAVADPLHRNYCCAVPR
GEALDLHKLAELTSIFEGKHDYQNFANRLQHKRRMSKKGEEFSTVRHVRSVELVSEAPEE
YAIHVLLDGALQRMVRNMVGGLWAVARGDMSEAELRRALDGPLYAKGRSPIRAAPAHGLT
LEWVYYDDF
NT seq 572 nt   +upstreamnt  +downstreamnt
tggtcgcagacgtccggctctggaacgtgtcgcacgcccctcctccccgagagaaaaacc
tggcggtccaaggagattggcacgctatgtacaacagccgttcaaagctctacacttatc
ggttctccacccgtgctgtggctgacccgctgcaccggaattactgttgcgctgtccccc
gtggcgaggcgctagacctacacaaattggctgagttgaccagcattttcgagggaaagc
atgattatcagaatttcgctaatcgcttgcaacacaagcggcgaatgagcaaaaaggggg
aagaattttcaaccgtaagacacgtgcggtccgtggagctagtttcggaggcgccagagg
aatacgcgatccacgtgcttttggatggagcactgcaacgtatggtcaggaatatggtgg
gaggactttgggccgtggcacggggagacatgagtgaagcggagctgcgaagggcattgg
acgggcctttgtatgctaagggaaggagcccgatcagagcagcaccggcgcacggattga
cgttggaatgggtttactacgacgatttctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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