KEGG T02383: Natgr

Natronobacterium gregoryi: Natgr_0319

Entry

Natgr_0319 CDS T02383

Definition

ATP-dependent DNA ligase I

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

nge Natronobacterium gregoryi

Pathway

nge03030	DNA replication
nge03410	Base excision repair
nge03420	Nucleotide excision repair
nge03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:nge03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:nge03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:nge03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:nge03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

429190348

NCBI-GeneID:

14207483

UniProt:

L0AEL7

Position

complement(319520..321241)

AA seq 573 aa
MEFATFADRAAAIEAEPADLAIIEHVQDLLADTDGDAESGEPRTIEIVARFVQGRVFPAW
DSTTLDIGPSACYEAISRAAGRNVDTNDVEDRLADVGEIGEVAASYEFGGQQGLDAFGAG
NGSGALTVREVYDDLVALAAAEGEGSEDRKIDALFGLFNRCSSDEARYLARLVLSEMRIG
VGEGTVRDAIAAAFDIPQEHVERALQVSNDYGEVARVARDEGLDGLDAMALEVGRPVQAM
LAQTGTVTDALEAWEEAAVEWKYDGARIQLHYDPDGLEEGDGTTRVFSRNMEDVTAALPE
VVEFAEKTLAVPVILDGEVVAVDDAGDPLPFQEVLKRFRRKHDVAKAREDVAVRPVCFDC
LHADGVDLLEEPLTTRHERLEVVLTGDGRPEDVAGLSLLWLTDDPDEIESIDAEALESGH
EGIMLKNPESAYSPGRRGKNWRKRKPDVETLDCVVTGAEWGEGRRATFLGTFELSVRNET
TGELETVGKVATGITDEQLAELTELLEPHIATEEGQEVEIEPAVVFEVGYEEIQSSPTYS
SGYALRFPRFQAVRDDKAIEGADTLERVERLRS

NT seq 1722 nt +upstreamnt +downstreamnt
atggagttcgccacgttcgccgaccgagccgctgcgatcgaagccgagcctgccgatctg
gcgatcatcgaacacgtgcaggacctcctcgcggacaccgacggcgatgcggagtccggt
gagccccggaccatcgaaatcgtcgcccggttcgtccagggacgggtcttccccgcgtgg
gattcgacgacgctcgacatcgggccgagcgcctgttacgaggcgatctcacgcgcggcc
gggcgaaacgtagacacgaatgacgtcgaggatcgactcgccgacgtcggcgagatcggt
gaggtggccgcgagctacgagttcggcggccaacaggggctggacgcgttcggggctggt
aacggaagcggcgccctcaccgtccgcgaggtctacgacgacctcgtcgctctcgcggct
gccgaaggggaaggcagcgaagaccggaaaatcgacgccctcttcgggctcttcaaccgg
tgctcgagcgacgaagctcggtacctcgcccgactcgtcctctcggagatgcgcatcggc
gtcggcgaagggaccgtccgggacgccatcgccgcggccttcgacatcccccaggagcac
gtcgaacgggcactgcaggtctcgaacgactacggcgaagtcgcccgcgtcgcccgcgac
gagggactcgatggactggacgcgatggccctcgaagtcggccggcccgtccaggcgatg
ctcgcccaaacggggacggtgacggacgcactcgaggcgtgggaggaagccgcagtcgag
tggaagtacgacggcgctcgcatccagttacactacgatcctgacggactcgaggaggga
gacgggacgacgcgggtcttctcgaggaacatggaagacgtcaccgccgcactcccggag
gtcgtggaattcgccgagaagacgctcgcggtccccgtgatcctggacggcgaggtcgtc
gcggtcgacgacgccggcgatccactcccgtttcaggaggtgctcaagcggttccgccgg
aaacacgacgtcgcgaaggctcgcgaggacgtcgccgttcggccggtctgcttcgactgc
ctgcacgccgacggtgtggacctgctcgaggagccactgacgaccagacacgaacgactc
gaggtcgttctcaccggcgacggacgacccgaggacgttgccggactctccctgctgtgg
ctgaccgacgaccccgacgagatcgagtcgatcgacgcggaggcgctcgagtcgggtcac
gaggggatcatgctcaaaaaccccgagtcggcgtactcgccggggcggcgtggcaagaac
tggcgaaagcgcaaacccgacgtcgagacgttagactgcgtcgtcacgggagccgagtgg
ggcgaaggtcgacgagcgaccttcctgggcacgttcgaactctctgtcaggaacgagacg
acgggcgaactagagaccgtcggcaaggtcgcgaccggcatcaccgacgagcaactcgcc
gaactgacagagctgctcgagccccacatcgctacagaggagggacaagaagtcgagata
gagcctgcggtcgtcttcgaggtcggctacgaggagatccagtcctcgccgacgtactcg
tcgggatacgcgcttcggtttcctcgctttcaggcagttcgagacgacaaggctatcgag
ggcgcggacacgctcgagcgcgtcgaacgactgcgatcctaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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