KEGG T03244: RG540

Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH17220

Entry

RG540_CH17220     CDS       T03244

Symbol

dksA

Name

(GenBank) RNA polymerase-binding protein DksA

K06204

RNA polymerase-binding transcription factor

Organism

ngg Neorhizobium galegae bv. orientalis HAMBI 540

Brite

KEGG Orthology (KO) [BR:ngg00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ngg03000]
    RG540_CH17220 (dksA)
   03021 Transcription machinery [BR:ngg03021]
    RG540_CH17220 (dksA)
   03009 Ribosome biogenesis [BR:ngg03009]
    RG540_CH17220 (dksA)
Transcription factors [BR:ngg03000]
Prokaryotic type
  Other transcription factors
   Others
    RG540_CH17220 (dksA)
Transcription machinery [BR:ngg03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     RG540_CH17220 (dksA)
Ribosome biogenesis [BR:ngg03009]
Prokaryotic type
  rRNA transcription factors
   RG540_CH17220 (dksA)

SSDB

Motif

Pfam:

DksA_CC zf-dskA_traR DUF1003

Other DBs

NCBI-ProteinID:

CDN47894

UniProt:

A0A068SPZ3

Position

1665122..1665541

AA seq 139 aa
MSEKIDLSNYVLSENDEFMNANQKAYFRAKLIAWKNDILREARETLGHLAEESANHPDLA
DRASSETDRAIELRARDRQRKLISKIDAALQRIEDGTYGYCEETGEPIGLKRLDARPIAT
LSIEAQERHERREKVYRDE

NT seq 420 nt +upstreamnt +downstreamnt
ttgagtgagaagatcgatcttagcaattatgtgctctctgaaaacgacgagttcatgaat
gcaaatcagaaagcgtatttccgggcaaaactgatcgcctggaaaaacgatattctgaga
gaagcgcgcgaaacgctcggccatctggctgaagagagcgccaaccaccccgatctcgcc
gaccgggcttcctccgaaaccgacagagctatcgaacttcgagcccgtgaccgtcagcgc
aagctgatttccaaaatcgatgccgccttgcagcgcattgaggacggcacctacggttac
tgcgaggaaacgggcgaaccgatcggcctcaagcgtctcgacgctcgtccgatcgccaca
ctgtcgatcgaagcgcaggaacgccacgagcgtcgtgaaaaggtctatcgggacgaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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