KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103734120
Entry
103734120         CDS       T03372                                 
Symbol
Ndc1
Name
(RefSeq) NDC1 transmembrane nucleoporin
  KO
K14315  nucleoporin NDC1
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03013  Nucleocytoplasmic transport
ngi05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103734120 (Ndc1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103734120 (Ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngi03019]
    103734120 (Ndc1)
Messenger RNA biogenesis [BR:ngi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103734120 (Ndc1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 103734120
NCBI-ProteinID: XP_008831241
Position
Un
AA seq 720 aa
MALGQGSAQAAFRAAPAGSSRGLPAFEQRWRAGTPFPARWRVGTAISMATVASGSCTGGS
RDILWRVLGWRIVTSIVWSVLLLPICTTVFIIFSSIDLFHPIQWLSDSFNDLYSSHVIFY
LLLLSVVIIIISIFNVEFYTVVPSIPGSRLALIGRLLHPQQLMHSFVHAAMGMVMAWCAA
VLTKGQYSFLVAPCTGTESLDSPAAQTCLNEYHLFFLLAGAFIGYSYSLLYFVNNMNYLP
FPIIQQYKFLYFRRSLVLLIKHSCVESMFLGRNFCIVYYFFGHIPKAWISTAMDLHIDEQ
ARRSLDTLSGLLNLSLLYHIWLYGVFLLMTWYISWVLFKIYATEAHVFPVQPPFAEESDA
CLPKVLNTNTPLIIKYLALQDLMMLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLL
NDMTQKLVLYQEAAATNGRVSSSYPVEPKKLNSPEETTLQTPKSSHMPQPSVSLVKTSLF
SSKLSTPDVSSPFGTPVGSSVVNRMAGIFDVNTCYGSPQSPQLIRRGPRLWTYTSDPQIS
EFSNPFSCTSITAEGKTVRQPNVVYSWIQSKCEQIKNFLSKRVLIVYFFSKHPEASIQAV
FSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSK
PPRISGSFVDTSYKTLRFALRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggcgcttgggcagggctctgctcaggcagcgtttagagcagccccggctgggtcctcc
cggggccttcctgcctttgaacagcggtggcgggcgggtactccgttcccggcacgttgg
agagtagggaccgccatctccatggccacagttgcgagtgggtcctgcaccggcgggtct
cgggacatcctctggcgcgttttgggctggaggattgttacaagtattgtttggtcagtg
ttgcttttacccatctgcaccacagtgtttataatcttcagcagcattgatttatttcat
cctatacagtggttgtcagattctttcaatgacttatatagttcccatgtaatcttttac
ctcctgctcctgtcagtggtaattataataataagtattttcaatgtggaattctataca
gttgtgccctccatacctggctccagactggctctgatagggaggctccttcaccctcag
cagctcatgcattcatttgtgcatgctgccatgggaatggtgatggcctggtgtgcagca
gtcctcaccaagggccagtacagttttctcgtggctccctgcactggaactgagagctta
gatagccctgctgcacagacctgcttgaatgaatatcatctttttttcctactggctgga
gcattcataggctatagctatagcctcctatattttgttaacaacatgaactatcttcca
tttcccatcatacagcagtacaaatttttgtacttcaggcgatctctcgtcttgctaatt
aaacatagctgtgtggaatccatgttcctgggtagaaatttctgcattgtgtattacttt
tttggccatattcctaaagcttggattagcactgctatggatcttcacatagatgagcag
gctcgaaggtctcttgacacactaagtggcctcctgaacctctccttactctatcacatc
tggctatatggtgtcttcctcctgatgacttggtacatctcatgggtactcttcaaaatc
tatgccacagaggctcatgtgttccctgttcagccaccatttgcagaagaatcagatgca
tgcctcccgaaggtcttaaataccaacacccctctcatcataaagtatttggctctgcag
gacctgatgatgctttctcaatattctccttctcgaagacaagaagtttttagcctcagc
cagccaggtggacatccccataactggactgccatttcaagggagtgtttgaatctttta
aatgatatgactcagaaactggttctctaccaagaagctgctgctacaaatggcagagtg
tcttcttcatacccagtggaacccaagaaactgaattctccagaagaaactactttgcag
acaccaaaatctagccatatgcctcagccttcagtgtcattagttaaaacatcactgttt
tcttcaaaattatctacacctgatgtttcaagtccctttgggaccccagttggctctagt
gtggtaaatcgaatggctggaatttttgatgtaaacacctgttatgggtctccccaaagt
cctcagctgataagaagagggcctcgattatggacttatacttctgatccgcaaatatct
gaattctctaatccattttcttgcacctctattactgctgagggtaagaccgtgagacag
cccaatgtggtttactcctggattcagagtaaatgtgaacagattaagaatttcttgtca
aaacgggtgctgatagtgtactttttcagtaagcacccagaggcttccattcaggctgtt
ttttcagatgcccaaatgcatatttgggctttagaaggtttatctcacttagtagcagcg
tcattcacagaagatagatttggagttgtccagactacactaccagctatccttaatact
ttgttgacactacaagaggcagttgacaagtatttcaagcttcctcacgcttccagtaaa
ccaccccggatttcaggaagctttgtggatacttcctacaaaacattaagatttgccttg
agagcctcactgaaaactgccatctatcgaataactaccacatttggtgaacatctgaat
gctgtgcaggcatctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaa
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (41)   

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