KEGG   Naegleria gruberi: NAEGRDRAFT_33472
Entry
NAEGRDRAFT_33472  CDS       T01241                                 
Name
(RefSeq) ran family small GTPase
  KO
K07936  GTP-binding nuclear protein Ran
Organism
ngr  Naegleria gruberi
Pathway
ngr03008  Ribosome biogenesis in eukaryotes
ngr03013  Nucleocytoplasmic transport
ngr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    NAEGRDRAFT_33472
   03008 Ribosome biogenesis in eukaryotes
    NAEGRDRAFT_33472
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    NAEGRDRAFT_33472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngr03019]
    NAEGRDRAFT_33472
   03009 Ribosome biogenesis [BR:ngr03009]
    NAEGRDRAFT_33472
   03016 Transfer RNA biogenesis [BR:ngr03016]
    NAEGRDRAFT_33472
   03036 Chromosome and associated proteins [BR:ngr03036]
    NAEGRDRAFT_33472
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ngr04147]
    NAEGRDRAFT_33472
   04031 GTP-binding proteins [BR:ngr04031]
    NAEGRDRAFT_33472
Messenger RNA biogenesis [BR:ngr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     NAEGRDRAFT_33472
Ribosome biogenesis [BR:ngr03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    NAEGRDRAFT_33472
  Pre-60S particles
    NAEGRDRAFT_33472
Transfer RNA biogenesis [BR:ngr03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    NAEGRDRAFT_33472
Chromosome and associated proteins [BR:ngr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     NAEGRDRAFT_33472
   Spindle formation proteins
    NAEGRDRAFT_33472
Exosome [BR:ngr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   NAEGRDRAFT_33472
GTP-binding proteins [BR:ngr04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    NAEGRDRAFT_33472
SSDB
Motif
Pfam: Ras Roc Gtr1_RagA Arf GTP_EFTU MMR_HSR1 G-alpha RsgA_GTPase ATP_bind_1 MMR_HSR1_Xtn Dpy-30
Other DBs
NCBI-GeneID: 8856916
NCBI-ProteinID: XP_002677355
JGI: Naegr1_33472
UniProt: D2VF30
AA seq 186 aa
GKSSFVKRLISNEFHGPYIPTLGVSVHAKKFETTHGDITFNIWDCAGQEKFGGKEGYYIN
GNCAIIMFDCVNSLKSVNNWLRDVVRICEGIPIVLCLNKADLLSEEARQRLKFEIAGFRG
RILNYFELSNKDSLNLEDPLEYLAKALLKNKHVSFFSKVRKQQENVFHQKLQNTSMTADA
NIKTIE
NT seq 561 nt   +upstreamnt  +downstreamnt
ggaaaatcatcctttgttaaaagattaatctcaaatgaattccatgggccatacattcca
acccttggtgtctctgttcatgcaaagaaatttgaaacaacccatggtgatatcactttc
aacatttgggattgtgcaggtcaagaaaagtttggaggcaaagaaggttattatatcaat
ggtaattgtgccatcattatgtttgattgtgtaaattctttgaaaagtgttaataattgg
cttagagatgttgtaagaatttgtgaaggcattccaattgtattgtgtctcaataaggct
gatctcttatcagaggaagcaagacaaagactcaaatttgaaatagcaggttttcgtggt
cgtattctcaactatttcgagttgtcaaataaggattcattgaatttggaagatccactc
gaatatttggccaaagcactgctcaaaaacaaacatgtttcattcttttccaaggtaaga
aagcaacaagaaaatgtattccatcaaaagcttcaaaacacttccatgacagcagatgcc
aacatcaagacaattgagtaa

  All links  
Ontology (7)   
   KEGG BRITE (7)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (35)   

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