KEGG   Naegleria gruberi: NAEGRDRAFT_54247
Entry
NAEGRDRAFT_54247  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K10849  DNA excision repair protein ERCC-1
Organism
ngr  Naegleria gruberi
Pathway
ngr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NAEGRDRAFT_54247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ngr03400]
    NAEGRDRAFT_54247
DNA repair and recombination proteins [BR:ngr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     NAEGRDRAFT_54247
SSDB
Motif
Pfam: Rad10 HHH_5
Other DBs
NCBI-GeneID: 8860749
NCBI-ProteinID: XP_002669432
JGI: Naegr1_54247
AA seq 597 aa
MDFDIDEEQEKEERELESYRQDANQRLAELKRNFKSSSSPSSSSATLRLPNSAPGLGSSN
NNNNLINFNQQQQTRQSSSVASSSNTPTTNYTSRIINRTPGTVVSPPNSIPSNSNVPFVP
QKFIPPQRISQTSQNSQNSQKSNSSPSVGSGSSSFVTPVKSSMTSLNQSTPPIFIPPFNS
STPSTPSSVGSSNSASASPLIESISPQVAVTSNPVPPNSYVPFPTTATTIVANEVQKKNP
IVKHIRDKVFKLHFTKDWTLTDYILGRQTTAFYLSLKFHMTKPKYILERIKNFHKTEICK
RGTFTNRIILVNVDVHVDACGDSSIYLSNHQDSQGENGGTFKAPTYVSETALDEALIEVT
RISMWADWTVICGFSDEECALYLETIRACETKGSSLIQGPNQSLASLQSSTNSLVTSTGG
QGKRKGNRRWSRESSSNSNSKPVEVEKLSHTEEVHQLFAATLKNTLNKRDHITLLNHFGS
LKEVIQTTSDELNDLPGFGKKKVKKLINLFQTPFIPGKEFPEPSSKKPTKKQSNIKLVKK
SILPQENEIDDEDDIFIVDKETGKEEKVNCKLKVKKKQSEIGSFFSQKPKTEEEDSD
NT seq 1794 nt   +upstreamnt  +downstreamnt
atggattttgatattgatgaggaacaggaaaaggaagaacgagaattggaaagttatcga
caagatgccaatcaaaggcttgccgaattgaaaaggaattttaaatcatcatcatcacca
tcatcgtcatctgctactttgaggcttccgaatagtgctccaggcttgggatcatccaat
aataataataatttaattaatttcaatcaacaacaacaaacgagacaatcatcgtctgta
gcaagcagtagcaacacaccaacaacaaattacacgagtagaattatcaatagaacacct
ggtactgtggtttctccaccaaatagcattccgagtaatagtaacgtgccattcgtgcca
caaaagtttattcctccacaaaggatttcacaaacatctcaaaattctcaaaattctcaa
aagagtaattcttctccgagtgttggtagtggatcttcatcttttgttactcctgtcaag
tcgtctatgacatctttgaatcaaagtactcctccaatatttattcctccatttaatagt
agtacaccatcgacgccttcttctgttggaagtagtaatagtgcttctgcttctccattg
attgaaagcattagtccacaagttgctgtaacatcaaatcctgtaccacctaattcgtat
gtgccttttcccaccactgccacaaccattgttgcaaatgaagtgcaaaagaagaatccc
attgtaaaacacattcgggacaaggttttcaaattacactttacaaaagattggacctta
actgattatattctaggaagacaaaccactgcattctatctcagtcttaaatttcacatg
accaaaccgaaatatattttagagagaattaagaattttcacaagactgaaatttgtaaa
agaggcacgtttactaatcgaatcattctagtgaatgtggatgtacatgtggatgcctgt
ggagattcatcaatttatctatctaatcatcaggactctcagggtgagaatggtggaacc
tttaaggcaccaacctatgtttcagagactgcactcgatgaggcactcatagaagtaacg
agaatttccatgtgggccgattggactgtgatttgtggattttcagatgaggaatgtgca
ctgtatttggaaaccattagagcatgcgagactaagggttcatcattgattcaaggacct
aatcaatcattggcctcacttcaatcatcaaccaattcattggttacatcaacaggagga
caaggtaaacgaaagggaaataggagatggagtagggaaagtagctccaatagcaactcc
aaaccagttgaggtagaaaaactttcgcacactgaggaagtgcatcaactctttgctgcc
actctgaaaaacacactcaacaagagagatcacattacattgctcaatcactttggatca
ctgaaagaggtcattcagacaacatctgatgaactgaatgacttgccaggttttggtaag
aagaaggtgaagaaactcatcaatctattccagactccatttattcctggaaaggaattt
ccagagccatcatccaaaaaaccaaccaaaaagcagagtaatattaagcttgtgaaaaaa
tcaattcttccccaggagaatgaaatagatgatgaagatgatattttcatagttgataag
gagacaggaaaggaagaaaaagtgaattgtaagctgaaagttaaaaagaagcaaagtgaa
attggctccttttttagtcagaaaccaaaaactgaagaggaagattcggactag

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