KEGG   Naegleria gruberi: NAEGRDRAFT_60607
Entry
NAEGRDRAFT_60607  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K11600  exosome complex component RRP41
Organism
ngr  Naegleria gruberi
Pathway
ngr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NAEGRDRAFT_60607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngr03019]
    NAEGRDRAFT_60607
Messenger RNA biogenesis [BR:ngr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     NAEGRDRAFT_60607
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     NAEGRDRAFT_60607
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 8848488
NCBI-ProteinID: XP_002677284
JGI: Naegr1_60607
UniProt: D2VEP3
AA seq 248 aa
MSSRIEYISPEGLRVDGRRSHEIRNIKFKLNLFSRADGSAYYEQGNTRVLAAVYGPREVK
NKSQMKNDRAIINCEYSMATFSTGERKRQFKKDRRSTEISVVIRQTFESVILTHLYPRTQ
IDIFMQVLQADGGTRCACINAATLALLDAGIPMKDFVVSCAAGFIQGSPLTDLNYIEDCA
GGPDVPIALLPKHDKVTLLQMDSKLSLDQFEKVLEHAIEGCKQIHKVIDEQLKKHTYALV
NKRGLFSA
NT seq 747 nt   +upstreamnt  +downstreamnt
atgagttcgcgtattgaatacatttcacctgaaggattgcgagttgatggaagacgttcc
catgaaattagaaatattaaatttaaattaaatttatttagtagagccgatggatcagca
tattatgaacagggcaatacacgtgtattagctgctgtttatggtccgagagaagtcaaa
aataaatcacaaatgaagaatgatagagcaattattaattgtgaatatagtatggcaaca
tttagtacaggagaaagaaagagacaattcaaaaaggatagaagatcgactgaaatttca
gttgtgattagacaaacatttgaatctgtaattttaacacatttatatccaagaacacaa
attgatattttcatgcaagttcttcaagctgatggaggtactagatgtgcttgtataaat
gctgcaacacttgccttattagatgcaggtattccaatgaaagattttgttgtttcatgt
gctgctggatttattcaaggttctccattaacagatttaaattatattgaagattgtgct
ggtggtccagatgtaccaattgctcttcttccaaaacatgataaggtcactttattacaa
atggattcgaaattatctttggatcaatttgaaaaggttttggaacatgcaatagagggt
tgtaaacaaattcacaaagttatagatgaacaattgaagaaacatacgtatgcactggtg
aataaaagaggtctgttttcggcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (101)   
   KEGG ORTHOLOGY (1)   
   RefGene (96)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (110)   

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