KEGG   Naegleria gruberi: NAEGRDRAFT_79094
Entry
NAEGRDRAFT_79094  CDS       T01241                                 
Name
(RefSeq) tRNA pseudouridine synthase family protein
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
ngr  Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ngr03016]
    NAEGRDRAFT_79094
Enzymes [BR:ngr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     NAEGRDRAFT_79094
Transfer RNA biogenesis [BR:ngr03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    NAEGRDRAFT_79094
 Prokaryotic type
    NAEGRDRAFT_79094
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-GeneID: 8859866
NCBI-ProteinID: XP_002679250
JGI: Naegr1_79094
UniProt: D2V9Q6
AA seq 758 aa
MKRTLEEGSEEQSKKLKIAQDKNPLSPYCDEESSVGISKYVDVILNGDSLDISLPPFTGI
MKQRFSDFIVHEIDRNGKVIYLTSTEIPESIKDKRSKDIDLDPEAKKENERKGIEEFKSI
ISDQTIVAGIEDFLQKHQETEDSLVEIVKQRKKIEEADVPTHLIKENDKNNRSKIHNIIK
EHFSHVMVSDTLNKDNDQYVRLRYQFQSFTLQTLFLNNQNNSKAKKREKRDNKKKGGRRE
QNNPATQSYFDPRQFAWPKERPNYIQFVLYKENSETTEIIGEMCRILKLKQKNFQIAGTK
DKRGITTQRVTGYQISAEKLMQVNQKCHKMVKVGNFEYVDRPLKLGDLSGNRFTLVLRDL
KIPEGSPFSNRNVEDIFRERIEQLNKYGYINYFGMQRFGITYNSVKREYHSDYPTHLLGQ
HLLKSNWKTLAKIILIAGIQNVRDQRAKQTIIDFTEGKISAEQCYNSLPKFKFNTEKIML
NSYVKTSENDHLAAIQALPMNLLSMYIHAYQSLVYNHMVSLRIEKYGLKVVVGDIVVSRS
ELKSCEDPKLTFESPITRIETEEQAQKYNIEDVVMSIPGYDIQFPSTEFVNKETYYKFML
ENGGITEEDYKKHLSQYRTFGAYRFMIEKAKDIEFEFKDYNPETNKLVETDYDNNITKKP
LEQIPCENTKKAAIISFSLNSSNYATMFVRELIRLPSVIDWKWIESNGNPQQQEEQQEQE
QTNEDDEVNDEEQSLATEQDHDETNPQEDVIADANMCE
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgaaaagaacattagaagaaggttcagaagaacaatctaaaaaactcaagattgcccaa
gataagaatccactctcaccatattgtgatgaagaaagttctgttggtattagtaaatat
gttgatgtaattttaaacggagattcattggatatttctttacctccattcactggtatt
atgaaacaaagatttagtgattttattgttcatgaaattgatagaaatggaaaggttatt
tatttgacaagtacagaaattcctgagagtatcaaggataaaagatcaaaggatattgat
ttggatccagaagctaaaaaggaaaatgaaagaaaaggaattgaagaatttaaatcaatt
atttctgatcaaacaattgttgctggtattgaagatttcttacaaaagcatcaagaaact
gaagattcacttgttgaaattgttaaacaaagaaaaaagattgaagaagctgatgttcca
acacatttaattaaagaaaatgataagaataatagatcaaagattcacaacattatcaag
gaacatttcagtcatgttatggtttcagatactttaaataaggataatgatcaatatgtt
agattgagatatcaattccaaagtttcactcttcaaactttattcttgaataatcaaaat
aatagtaaagccaagaagagagaaaagagagataacaaaaagaagggaggaagaagagaa
caaaataatccagcaactcaatcatatttcgatccaagacaatttgcttggccaaaagaa
agaccaaattatattcaatttgttttatataaggaaaatagtgaaaccactgaaattatt
ggtgaaatgtgtagaattttgaaattgaaacaaaagaatttccaaattgcaggtacaaaa
gataagagaggcatcacaactcaaagagttactggttatcaaattagtgctgaaaaatta
atgcaagttaatcaaaaatgtcacaaaatggttaaagttggtaattttgaatatgttgac
agaccattgaaacttggtgatttgagtggtaacagatttacacttgttttaagagattta
aaaattccagaaggaagtccattttcaaatagaaatgttgaagatattttcagagaaaga
attgaacaacttaacaagtatggttatatcaattattttggtatgcaaagatttggtatt
acttacaatagtgttaagagagaatatcatagtgattatccaactcatttattgggtcaa
catcttttgaaatccaattggaaaactttagctaaaattattttaattgctggtattcaa
aatgtcagagatcaacgtgctaaacaaacaattattgattttacagaaggaaagatttca
gctgaacaatgttataattcacttccaaaattcaaatttaatactgaaaagatcatgttg
aattcctatgtgaaaacatctgaaaatgatcatttggcagcaattcaagcattaccaatg
aatttattatccatgtatattcatgcctatcaatcacttgtatataatcatatggtttca
ttgagaattgaaaaatatggattgaaagttgttgttggagatattgttgtttctagaagt
gaattaaagagttgtgaagatccaaaattaacatttgaaagtccaattactagaattgaa
actgaagaacaagctcaaaaatacaatattgaagatgttgtaatgagtattccaggttat
gatattcaattcccatccactgaatttgttaataaggaaacttattataaattcatgtta
gaaaatggtggaattactgaagaagattataagaaacatctttcacaatatagaacattt
ggtgcctatcgtttcatgattgaaaaagcaaaagatattgaatttgaatttaaagattac
aatccagaaacaaacaaattagttgaaactgattatgataataacattacaaagaaacct
ttggaacaaattccatgtgaaaataccaaaaaggcagctattatttccttctctctcaac
tcttccaattatgcaaccatgttcgttcgtgaactaattcgtcttccatctgttattgat
tggaaatggattgaaagtaatggaaatccacaacaacaagaagaacaacaagaacaagaa
caaacaaatgaagatgatgaagttaatgatgaagaacaatcacttgctactgaacaagat
catgatgaaaccaatccacaagaagatgttattgctgatgctaatatgtgtgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (48)   

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