KEGG T01241: NAEGRDRAFT

Naegleria gruberi: NAEGRDRAFT_79495

Entry

NAEGRDRAFT_79495 CDS T01241

Definition

ATP-dependent DNA ligase IV

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

ngr Naegleria gruberi

Pathway

ngr03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ngr03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N BRCT DNA_ligase_A_C mRNA_cap_enzyme PTCB-BRCT

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 1059 aa
MFRNPFLVVDDDEDETLSETTTNNKHSNNMNNLILHNDEEIENSCPSAVRAMMNDSRMDI
FINADDDDDEDEDDDTSKSNSQTSGANSTKSNTLHNKENSSRTNNEQNINNNNNLFAGMI
GNSNGTPLPAHPPPVYDPNLPSCRVQFATLCKYFEKLSENNKHKEKKAIFDKIFVSCRSD
LFQFMRLLLPQLDRERLTYGLKESKIAKYYIEILALPQTCEDALRLKKWKDPSKGTGNSF
SDICFQVLQKRGWSSSKNLTVFFINEKLTELSMAGDNDKKKKILLDILKSTSCFEQKWIL
RIILKDLRIGTQHTTILNHFHPNALELFNSCTDLREVITKCLDPKFKFTTAELRVFSMFK
PMLASLLHPAKLAETLSSDEYVIEPKYDGERILVHKKESEIMFFTRNGKDYTSLYGPKFS
PIIRNNIKAKVCILDGEFLIWNTELEAFKEFGHNRTHALNDTSDTNEQFCYMVFDLVYLK
DKDLSQYPLKKRRTYLENIINLQSHVLELVPQTPVSSEKEVYEQLDIAIMNRDEGIMLKP
TGGVYIPGERKWIKLKPDHVDGMGETLDVIIVGGFYGTKFKRKSVSHFLLAVATRSKHSL
GNTDALDNLDEENEASNENQVFHSFCKVGSGYTNIELLALQKDLESHWKPFDKTKLPKFY
GQWIPGAGEMPDVYIEPKHSKILEIKGYSFQESTKFKTGVTLRFPRVVSIRNDKDWNECL
DLQGLEEMIEISRNGNHKRRAANMDSVVSHNDIKKQKRKKMVQNPDGTFTEVEPKSRKAT
AAVSHFFDYDMSKLDKTSSLFKGLEFVVFNGDEHKSKYDIEQLIVSNSGTKVQNPNDHKN
QYLIAANTNNITVRNWISSSQNRKNPLGDRDIIHYKWLIESVIYGSLQRFHPGYMIYTSQ
ATLLSFKEQMDEFQDEYLFDATVESLRNSLQLASLSSKYFVLDSKQIDMINSRYEIKTSQ
TSFFKGVVAFIDKYEKFGDPSSELILGLDTLEVYIRLHGGKVSNLLTTEVTHIVHDESEN
TTRLQSLKRKAARVNLKLVSGDWVRKCVEERRLIPEISV

NT seq 3180 nt +upstreamnt +downstreamnt
atgtttagaaatcccttccttgttgtggatgatgatgaggatgaaactctttcggaaaca
acaaccaacaacaagcacagcaacaatatgaataatctaatactacacaacgatgaagaa
attgaaaacagttgtccatcggccgttcgtgccatgatgaacgactcacgaatggatata
ttcatcaatgctgatgatgacgatgatgaagatgaagatgacgatactagtaaatcaaac
tctcaaacgagtggtgccaatagtactaaaagtaatacccttcacaataaggaaaattca
tctcgaaccaacaatgaacaaaatattaataataataacaatctctttgctggtatgatt
ggtaattcgaatggaacacctctacctgctcatcctccaccagtgtatgatcctaacctt
ccatcgtgtagggttcaatttgcaacattgtgtaaatactttgaaaaactttcggaaaat
aacaaacataaggagaagaaggcaatctttgataagattttcgtgagttgtcgaagtgat
ttgtttcaatttatgagattacttctccctcaattggatagagaaagactgacttatggc
ttgaaagagtcgaaaattgccaagtattatattgaaattctggctcttccacaaacgtgt
gaagatgctctgagattgaaaaagtggaaagatccatctaaaggaactggaaacagcttt
tcggatatttgctttcaagtcttgcaaaagagaggttggtcctcatcgaaaaatctaact
gtattctttattaatgaaaaactaactgaactatcaatggctggggataatgataaaaaa
aagaagattctgttggacattctcaagagcacttcatgctttgaacaaaagtggattctc
agaattattctcaaagatttaagaattggaactcaacacaccactattctgaatcatttt
catccgaatgcactcgagttgttcaattcatgtactgatctgagagaggtcattacaaag
tgtctcgatccaaagtttaaattcacaacagctgaattgagagtcttttcaatgttcaaa
ccaatgcttgcttcattgttgcatccagctaaattggctgaaactctctcctctgatgaa
tatgtcattgaacccaaatatgacggagaacgtatcctggtacacaagaaggaatctgaa
atcatgttctttacacgtaatggcaaggactatacgagcttgtacggtccaaagttttca
cccatcattagaaataatatcaaggcaaaagtttgtatattagatggagagtttctcatt
tggaatactgagctggaggcctttaaggaatttggacacaatagaactcatgctctgaat
gatacatccgatacaaatgaacaattttgctacatggtctttgatttagtctatttgaaa
gataaggacctatcacaatatccactcaagaagagaagaacctatctggagaatatcatt
aatctccagagccatgttctcgagttggtacctcaaactccagtatcatcagagaaggaa
gtttacgagcagttggatattgccatcatgaatagagatgaaggtatcatgctcaaacca
acaggaggcgtctatattccaggtgagagaaagtggatcaaattgaaacctgatcatgtc
gatggtatgggtgagacattggatgtaattattgttggaggattctatggaaccaaattt
aagagaaaatcagtttcacactttctgttagctgtagccacaaggtcaaaacacagtctg
gggaacacggatgctctcgataatttggatgaggaaaatgaagcaagcaatgaaaatcaa
gtttttcactcattttgtaaagtaggaagtggatataccaacattgaattgttggctcta
caaaaagatttagaatctcattggaagccttttgacaagaccaagttgcctaagttttat
ggtcaatggattccaggagcaggtgaaatgcctgatgtatatattgaaccgaaacattcc
aagattttggaaattaagggatactcttttcaggagagtaccaaatttaaaacaggagtc
acactaagattcccaagagttgtatcaataagaaacgataaggattggaatgaatgtctg
gatttacaaggattagaggaaatgattgaaatatcaaggaatggtaatcacaagagaaga
gctgccaatatggactctgttgtttcacacaatgatatcaagaaacaaaagagaaaaaag
atggttcaaaatcctgatggaacgtttacagaagtggaaccaaaatcaagaaaggcaaca
gctgctgtttcacatttctttgattatgatatgtctaaactggataagacctctagctta
tttaaaggattggaatttgttgttttcaatggagacgaacataaatccaagtatgatatt
gaacaattgatagtttccaatagtggaactaaagttcagaaccctaacgatcataagaat
caatatctcatcgctgccaatactaataatattactgtaagaaattggataagttcctca
caaaatagaaagaatccactaggagatcgcgatattattcattacaagtggttgattgaa
tcggtaatatatggctctctgcagagattccatccaggatacatgatttatacttctcaa
gccacattgctctcattcaaagagcaaatggacgaatttcaagatgaatatttgtttgat
gctacggtggaatcattgagaaactcgcttcaattagcctcactttcatccaagtatttc
gttctagactcaaagcaaattgatatgattaattcacgatacgagattaaaacatcacaa
acatcattcttcaagggagttgtagcttttattgacaagtatgaaaagtttggagatcca
agctcagaactgattcttggattggacactttggaagtttacattcgtttacacggagga
aaggtcagtaatttactcaccactgaagtgacacatattgtgcatgatgagagtgaaaat
accacccgcttacaatcactaaagagaaaggcagctagagtaaacctcaaacttgtctct
ggggattgggttaggaaatgtgtagaagaaagaagattaattccagaaatctctgtctaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-NGR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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