KEGG   Nocardiopsis gilva: CDO52_12585
Entry
CDO52_12585       CDS       T05022                                 
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
ngv  Nocardiopsis gilva
Pathway
ngv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ngv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CDO52_12585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ngv03400]
    CDO52_12585
DNA repair and recombination proteins [BR:ngv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CDO52_12585
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CDO52_12585
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C UVR ResIII DEAD AAA_19 UB2H AAA_22 AAA_16 UvrD-helicase AAA_5 nSTAND3 TrwB_AAD_bind LcrG HerA_C DUF87 AAA
Other DBs
NCBI-ProteinID: ASU83510
UniProt: A0A223S5W0
Position
2772490..2774598
AA seq 702 aa
MRPVTDIQRKMAPFDVVSEMSPAGDQPSAIAELSRRINAGNNDSVLLGATGTGKTATVAW
LVEQVQRPTLVMQPNKTLAAQFANELREMLPNNAVEYFVSYYDYYQPEAYVPQTDTYIEK
DSSINDEVERLRHSATNSLLTRRDTIVVASVSCIYGLGTPQEYVDRMAMLSVGMEVDRDD
LLRKLVEMQYTRNDMAFTRGTFRVRGDTIEIIPVYEELAIRIEMFGDEVERLQTLHPLTG
EVLGEDEEMYIFPASHYVAGPERTERAVRQIEAELGERLSELEAQGKLLEAQRLRMRTTY
DLEMLHQIGTCSGIENYSRHFDGREPGSAPNTLLDYFPEDFLLVVDESHVTVPQIGGMYE
GDASRKRTLVDHGFRLPSALDNRPLKWEEFLERIGQTVYLSATPGPYELRQSGGDVVEQV
IRPTGLVDPEVVVKPTDDQIDDLVHEIRVRSERDERVLVTTLTKKMAEDLTDYFAELGIR
VRYLHSEVDTLRRVELLRELRVGEFDVLVGINLLREGLDLPEVSLVAILDADKQGFLRSE
TSLIQTIGRAARNVAGQVFMYADTVTEAMRNAIDETNRRRAKQQAYNEENGIDPQPLRKK
IADILDSLAREDVDTEELLGTGYRKGEKGKAPVPALSSTAGEERSADVAKMPRAELADLI
DQLGEQMHQAAADLQFELAARLRDEIKELKRELRGMDAAGVS
NT seq 2109 nt   +upstreamnt  +downstreamnt
gtgcggccggtgaccgatatccagcgcaagatggcgcccttcgacgtggtttcggagatg
tcgcccgcgggcgaccaaccctcggcgatcgccgagctgtcccggcggatcaacgccggg
aacaacgacagcgtgctgctgggcgccaccggtacgggtaagaccgccacggtggcgtgg
ctggtggagcaggtccagcggcccacgctggtcatgcagcccaacaagacgctcgccgcg
cagttcgccaacgagctgcgcgagatgctgcccaacaacgcggtcgagtacttcgtctcc
tactacgactactaccagcccgaggcctacgtcccgcagaccgatacctacatcgagaag
gactcgtccatcaacgacgaggtggagcggctgcggcactcggccaccaactcgctgctc
acccggcgcgacaccatcgtggtcgcctcggtgtcgtgcatctacggcctgggcacgccg
caggagtacgtcgaccgcatggcgatgctcagcgtcggcatggaggtcgaccgcgacgac
ctgctgcgcaagctcgtcgagatgcagtacacccgcaacgacatggccttcacccgcggg
acgttccgggtccgcggggacaccatcgagatcatcccggtctacgaggagctggccatc
cgcatcgagatgttcggtgacgaggtcgagcgcctgcagaccctccacccgctcaccggt
gaggtgctgggcgaggacgaggagatgtacatcttccccgcctcccactacgtggcgggc
cccgagcgcaccgagcgggccgtccgccagatcgaggccgagctgggcgagcgcctgagc
gagctggaggcccagggcaagctgctggaggcgcagcggctgcgcatgcgcaccacctac
gacctggagatgctgcaccagatcggcacctgctcgggcatcgagaactactcgcggcac
ttcgacggccgcgagccgggcagcgcgcccaacaccctcctcgactacttccccgaggac
ttcctcctcgtcgtcgacgagtcgcacgtcaccgtcccgcagatcggcggcatgtacgag
ggcgacgcctcccgcaagcgcaccctggtcgaccacggcttccggctgccctcggcgctg
gacaaccggccgctgaagtgggaggagttcctggagcggatcggccagacggtctacctg
tcggccacccccgggccctacgagctgcggcagagcggcggcgacgtcgtcgagcaggtc
atccggcccaccgggctggtcgacccggaggtcgtcgtcaagcccaccgacgaccagatc
gacgacctggtccacgagatccgggtgcgctccgagcgcgacgagcgggtcctggtcacc
acgctgaccaagaagatggccgaggacctcaccgactacttcgccgaactcggtatccgg
gtgcgctacctgcacagcgaggtcgacaccctgcgccgcgtggagctgctgcgcgagctg
cgcgtgggcgagttcgacgtcctggtcggcatcaacctgctgcgggagggcctggacctg
cccgaggtgtcgctggtggcgatcctcgacgccgacaagcagggcttcctgcgctcggag
acgtcgctgatccagacgatcgggcgcgcggcccgcaacgtcgccgggcaggtcttcatg
tacgccgacacggtcaccgaggccatgcgcaacgccatcgacgagaccaaccggcgccgg
gccaagcagcaggcctacaacgaggagaacggcatcgacccgcagccgctgcgcaagaag
atcgccgacatcctcgactcgctggcccgggaggacgtcgacaccgaggagctgctgggc
accggctaccgcaagggcgagaagggcaaggcgccggtcccggccctgtcctcgacggcg
ggcgaggaacgctcggccgacgtcgccaagatgccgcgcgccgagctcgccgacctgatc
gaccagctgggcgagcagatgcaccaggcagcggccgacctgcagttcgagctggccgcg
cggttgcgcgacgagatcaaggagctcaagcgcgagctgcgcggcatggacgccgccgga
gtgagctga

DBGET integrated database retrieval system