KEGG   Nitrobacter hamburgensis: Nham_0048Help
Entry
Nham_0048         CDS       T00348                                 

Definition
(GenBank) DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
nha  Nitrobacter hamburgensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:nha00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Nham_0048
Enzymes [BR:nha01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Nham_0048
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Nham_0048
DNA repair and recombination proteins [BR:nha03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Nham_0048
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
complement(53229..54110)
Genome map
AA seq 293 aa AA seqDB search
MPELPEVETVRRGLQPAMEGATIVRAETRRKDLRFPFQTDFVARLEGQTVTGLGRRAKYL
LADLASGDVLLMHLGMSGSFRVIDAAGATAPGDCHHPRNEDRAHDHVSFTMSSGASVIFN
DPRRFGYMKVIARTVLNDEPLLKGLGPEPLGNEFDAAMLARACRDKKTSLKAALLDQRVV
AGLGNIYVCEALFRAHLSPRRLAATLASKTGGPADRAGRLVEAIHDVLNQAIKAGGSSLR
DHRQTTGELGYFQHSFRVYDREGEKCRTPTCRGTVKRFTQNGRSTFWCPVCQK
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactccccgaagtcgaaaccgttcgtcgcggcttgcagcctgccatggagggc
gcgaccatcgttcgcgctgagacccgtcgcaaggacctgcggtttccgttccagaccgat
tttgtcgcccgcctggagggccagaccgtgaccgggctcgggcggcgggccaaatacctg
ttggcggacctcgcctccggcgacgtgctgttgatgcatctcggcatgtccggctcgttc
cgcgtgattgatgcggccggtgccacggctccgggcgattgtcaccatccgcgcaacgag
gaccgcgcccacgaccatgtgagttttacgatgtcgtcgggcgccagcgtgatcttcaac
gatccgcgccggttcggctacatgaaggtcatcgcccgcacggtgctcaacgacgagccg
ctgctgaaagggctcggcccggagccgctcggcaacgaattcgacgcggcgatgctggcg
cgcgcgtgccgcgacaaaaagaccagcctcaaggccgcgctgctcgaccagcgcgtggtc
gcggggctgggcaacatctatgtgtgcgaggcgctgtttcgcgcacacctgtcgccgcgt
cgtctcgccgcgacgctggcttcgaaaacgggggggccggccgatcgtgccggacggttg
gtcgaggccattcacgacgtgctcaatcaggcgatcaaggccggcggatcgtcgctgcgc
gatcatcgccagaccacgggcgaactgggttacttccagcattcgtttcgggtctacgac
cgcgagggcgaaaaatgccggacgccgacatgcaggggcacggtaaagcgttttacgcag
aacggacgttcgacgttctggtgtccggtttgtcagaagtag

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