KEGG T00348: Nham

Nitrobacter hamburgensis: Nham_0776

Entry

Nham_0776         CDS       T00348

Name

(GenBank) 23S rRNA m(5)U-1939 methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

nha Nitrobacter hamburgensis

Brite

KEGG Orthology (KO) [BR:nha00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nha03009]
    Nham_0776
Enzymes [BR:nha01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Nham_0776
Ribosome biogenesis [BR:nha03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Nham_0776

SSDB

Motif

Pfam:

tRNA_U5-meth_tr MTS Methyltransf_25 Methyltransf_31 TRAM Met_10

Other DBs

NCBI-ProteinID:

ABE61655

UniProt:

Q1QQ42

Position

complement(856170..857414)

AA seq 414 aa
MTKHLVIDHVGHRGDGVALTDGGNVFVPYALGGETVEVEPLAGRPDRARLLRVATPSPER
IAPFCPHFGACGSCAVQHWQPEAYRAWKRQIVIDTLTQAGIGCEVTDLIDAHGAGRRRIT
VHARRGENGGMRVGFAAPNSHAIVPIDTCPILDPALHGALDAARALADVLRPANKPLDIQ
VTAADNGLDVDVRGSGPLPAALIATLSRVAEAHRLARLTRHGELVLMRAPPEIGIGAARL
VLPPGSFLQATVAGEEALAALVAAHCGKARHIADLFCGVGPFALRLAAGARVTAFDSDAG
AIGALQKAAATTHGLKPVKAEARDLFRRPLLTQELRDIDVAVFDPPRQGAQAQSKQLAAS
KIPVIVAVSCSIATFARDARILIDGGYRLETVTPVDQFRHSPHVELVAKFLRRR

NT seq 1245 nt +upstreamnt +downstreamnt
atgaccaaacacctggtcatcgatcacgtcggccatcgcggcgacggcgtcgcgctgacg
gatggcggcaacgttttcgtcccctacgcgctcggaggcgaaaccgtggaggtcgagccg
ctcgcgggccgtcccgaccgcgcgcgactcctccgtgtcgcaacgccgagccccgagcgg
atcgcgccgttctgtccgcacttcggcgcctgcggcagctgcgccgtccagcactggcag
ccagaggcctaccgcgcctggaagcggcagatcgtgatcgacacgctgacgcaggccggc
atcgggtgcgaggtgactgatctgatcgacgcgcacggcgcgggacgacggcggatcacc
gtccatgcccggcgtggcgagaacggcgggatgcgcgtcggattcgccgcgccgaacagc
catgccatcgtgccgatcgacacctgcccgatcctcgatcccgctttgcacggcgcgctc
gatgcggcgcgcgcgctggccgatgtgctgaggcctgcgaacaagccgctcgatatccag
gtgaccgccgccgacaatggcctcgatgtcgatgtccgcggctctggaccgctgcccgcc
gcgctgatcgcgacactgtctcgcgtcgccgaggcgcaccggctggcgcggctgacccgt
cacggcgaactggtgctgatgcgcgcgccgccggagatcggcatcggcgccgcgcggctc
gtcctgccgccgggctcgttcctgcaggcgactgtcgctggcgaggaagcgctggcggcg
ctggtggccgcgcattgcggcaaggccaggcatatcgccgacctgttctgcggcgtcggc
ccgttcgcgctgcggctcgcggctggcgcccgggtcacggccttcgacagcgacgccggc
gcgatcggcgccttgcaaaaagccgctgcaaccacgcatggcctgaagccggtcaaggcc
gaggcccgcgacctgttccgccgcccgctgctgacgcaagagctgcgcgacatcgacgtc
gcggtattcgatccgccgcggcagggcgcacaagcgcagagcaagcaactcgccgccagc
aagattcccgtcatcgttgcggtgtcgtgcagcatcgcgacattcgctcgcgatgcgcgc
atcctgatcgatggcggctaccggctcgaaaccgtgacccccgtcgaccagttccggcat
tcgccgcatgtggaactggtcgcgaagtttttacgtcggcgttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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