KEGG   Nitrobacter hamburgensis: Nham_2084
Entry
Nham_2084         CDS       T00348                                 
Name
(GenBank) ribonucleoside-diphosphate reductase class II
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
nha  Nitrobacter hamburgensis
Pathway
nha00230  Purine metabolism
nha00240  Pyrimidine metabolism
nha01100  Metabolic pathways
nha01232  Nucleotide metabolism
Module
nha_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
nha_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:nha00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Nham_2084
   00240 Pyrimidine metabolism
    Nham_2084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nha03400]
    Nham_2084
Enzymes [BR:nha01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Nham_2084
DNA repair and recombination proteins [BR:nha03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Nham_2084
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Acetyltransf_11
Other DBs
NCBI-ProteinID: ABE62881
UniProt: Q1QLL6
Position
2324343..2328134
AA seq 1263 aa
MRFQRRYTKDGQSPYAEIDFRLTTSEIRNPDGSVVFRLENVEVPEFWSQVASDVLAQKYF
RKAGVAARLKKVEEETVPSWLWRSVPDTEALSLLPEKERFGSELSSKQVFDRLAGCWTYW
GWKGGYFSSEDDARAFNDELRYMLARQMVAPNSPQWFNTGLHWAYGVDGPGQGHYYVDFK
TGKMTRSKSSYEHPQPHACFIQGIEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSRLRG
EGERLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIETYIDWKVKE
EQKVAALVTGSKLNQKHLKAIMKACVNCEGSGDDCFDPEKNPALRREIKLARRALVNDNV
IKRVIQYARQGYKDIDFPVYDTDWDSEAYLTVSGQNSNNSVSLRDDFLRAVETDGDWNLI
GRTNKKVMKTLKARDLWEKIGYAAWASADPGLHFNTTMNDWHTCKASGDIRASNPCSEYM
FLDDTACNLASANLITFYDTALKRFDVDAYEHVCRLWTVVLEISVLMAQFPSKAIAELSY
EFRTLGLGFANIGGLLMTMGLPYDSKEGRALCGALTAIMTGIAYKTSAEMAGELGAFHGY
KKNTGHMLRVIRNHRRAALGQSHGYEALAVNPVPLDHASCPQADLIVHATKAWDDALALG
EQHGYRNAQVTVVAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYWKIINRAVPEALR
VLGYRESEIAEIEAYAVGHGSLSNAPGINVSTLKAKGFTDEAIAKVEKALPTAFDIKFAF
NKWTFGEDFIRDTLGIDSETIASPTFDLLAAVGFSKREIEAANVHICGAMTVEGAPHLKA
EHYAVFDCANPCGKIGKRYLSVESHIRMMAASQPFISGAISKTINMPNDATVDDCKSAYL
LSWKLALKANALYRDGSKLSQPLNSQLISDDDEEDDAIETFYDKPMAARTAQVSERVVEK
LVERIVVLREREKMPDRRKGYTQKAVVGGHKVYVRTGEYDDGRIGEIFIDMHKEGAALRS
FINNFAIAVSLGLQYGVPLEEYVDAFTFTRFEPAGPVQGNDSIKYATSILDYVFRELAVS
YMGRYDLAHVDPSESGFDAIGKGVAEGKEPEGQQATRYVSKGLTRSRTDNLVVMRGSSSS
PLGGEGSARSVSTSPSPLAGEDRGGGANVTALSSSRMGDTLEGATALKQEAPHDLSPTER
LKQQQRSKAGAPAQAAPSKAERRAEAKAKGYEGEMCSECGNFTLVRNGTCMKCDTCGSTT
GCS
NT seq 3792 nt   +upstreamnt  +downstreamnt
atgcgattccaacggcgttacaccaaagatggccagtctccctatgcggagatcgatttc
cggctgacaacgagcgagatccgcaatccggacggctcggtggtgtttcgcctcgagaac
gtggaagtgccggagttctggtcgcaggtggcttccgacgttctggcccagaagtatttc
cgcaaggcgggcgtcgcggcgcgcctgaagaaggtcgaggaagagaccgtgccgtcgtgg
ctatggcgctcggtgccggacaccgaggcgctcagcctgctgcccgaaaaagagcgcttc
ggcagcgaactctcttcaaagcaggtgttcgatcggctcgcggggtgctggacctattgg
ggctggaaaggcggctacttttcaagcgaggacgacgcccgcgccttcaatgacgagttg
cgctacatgctggcgcgccagatggtggcgccgaactcgccgcagtggttcaacaccgga
ctgcattgggcctacggcgtcgacggacccggccagggccactactacgtcgacttcaag
accggcaagatgaccaggtcgaagtcgtcctacgagcatccgcagccgcacgcctgcttc
atccagggcatcgaggacgacctcgtcaacgagggcggcatcatggacctgtgggtgcgc
gaagcgcgtctgttcaagtacggctccggcactggctcgaatttctcgcggctgcgcggc
gaaggtgaacgcctctccggtggcggccgatcctccggcctgatgagcttcctcaagatc
ggcgaccgcgccgcgggcgcgatcaagtcgggcggcaccacgcgccgcgccgccaagatg
gtggtggtcgatgccgaccatccggacatcgagacctacatcgactggaaggtgaaggag
gagcagaaagtcgccgcgctggtcaccggctcgaagctgaaccagaagcacctcaaggcc
atcatgaaggcctgcgtcaactgcgagggctcgggcgacgactgcttcgatccagagaag
aacccggcgctgcgccgcgagatcaagctggcgcgccgcgcgctggtcaacgacaacgtc
atcaagcgggtgatccagtacgcccggcagggttacaaggacatcgacttcccggtctac
gataccgactgggactccgaggcctatctcaccgtctccggccagaactccaacaactcg
gtgtcgctgagggacgacttcctgcgcgcggtcgagaccgacggcgactggaatctgatc
ggccgcaccaacaagaaagtgatgaagacgctgaaggcccgcgatctctgggagaagatc
ggctacgccgcctgggcgtcggccgatcccggcctgcacttcaacaccaccatgaacgac
tggcacacctgcaaggcgtccggcgacatccgcgcgtcgaatccgtgctcggaatacatg
tttctcgacgatactgcctgcaacctcgcctccgccaacctgatcacgttctacgacacc
gccttgaagcgttttgacgtcgatgcctacgagcacgtctgtcgtctgtggaccgtcgtg
ctggaaatctcggtgctgatggcccagttcccatcgaaggcgatcgcggaactgtcctat
gaattccgcacgctgggcctcggcttcgccaacatcggcggccttttgatgaccatgggc
ctgccctatgacagcaaggaaggccgcgcgctgtgcggcgcgctgaccgcgatcatgacc
ggcatcgcctacaagacgtccgccgagatggccggcgaactcggcgccttccacggctac
aagaaaaacaccggccacatgctgcgcgtgatccgcaatcaccgccgcgccgcgctcggt
cagtcgcacggctacgaggcgctcgcggtcaacccggtgccgctcgaccatgcctcctgc
ccgcaagccgacctcatcgtccacgcgacgaaggcgtgggacgatgcgctcgcgctcggc
gaacagcacggctaccgcaatgcgcaggtcaccgtggtggcgccgaccggcaccatcggc
ctcgtgatggattgcgacaccaccggcatcgagcctgacttcgcgctggtgaaattcaag
aagctcgccggcggcggctactggaagatcatcaaccgcgccgtgccggaggcgctgcgc
gtgctcggctatcgcgagagcgagatcgccgagatcgaggcctatgcggtcggtcacggc
tcgctgtccaacgcgcccggcatcaacgtctccaccttgaaagctaaaggcttcaccgac
gaagccattgccaaggtggaaaaggcgctgccgaccgcgttcgacatcaagttcgccttc
aacaaatggacgtttggcgaagacttcatccgcgacacgctcggcatcgactccgagacc
atcgcctcgccgaccttcgacctgctcgcggcggtcggcttcagcaagcgtgaaatcgaa
gccgccaacgtgcacatctgcggcgcgatgacggtggaaggcgcgccgcacctcaaggcc
gagcactacgcggtgttcgactgcgccaatccctgcggcaagatcggcaagcgctatttg
tcggtggagagccacatccggatgatggcggcgtcgcaaccgttcatctcgggcgcgatc
tcgaaaaccatcaacatgccgaatgacgccacggtggacgactgcaagtcggcctatctt
ttgtcctggaagctcgcgctgaaagctaacgcgctctatcgcgacggctcgaagctcagc
cagccgctcaactcgcagctcatcagcgatgacgacgaggaggacgacgcgatcgagacg
ttctatgacaagccgatggcggcgcgcaccgcgcaggtatcggaaagggtcgtggagaaa
ctggtcgagcgcatcgtcgtgctgcgcgaacgcgagaagatgccggaccgccgcaagggc
tatacccagaaggcggtcgtcggcggccacaaggtttacgtccgcaccggcgaatacgac
gacggccgcattggcgagatcttcatcgacatgcacaaggaaggcgcggcgctgcgctcc
ttcatcaacaacttcgccatcgcggtgtcgctcggcctgcaatacggcgtgccgctggaa
gagtatgtcgacgccttcaccttcacccgcttcgagcctgccggcccggtgcagggcaac
gactccatcaagtacgcgacgtcgatcctcgactatgtgttccgcgaactcgcggtgagc
tatatgggccgctacgacctcgcccatgtcgatcccagcgaatccggtttcgacgccatc
ggcaagggtgtcgccgaaggcaaggagccggaaggccagcaggccacccgttacgtctcc
aagggcctgacccgctcgcgtaccgacaatcttgtggtgatgcgtggctcttcttcctcc
ccgctcggtggggagggtagcgcacgaagcgtctctacttctccctcccccctcgcgggg
gaggatcgaggtgggggggccaatgtcaccgccctctcctcttcgcgcatgggcgacacg
ctcgaaggcgcgaccgcgctgaagcaggaagcaccgcacgatctttcgccgactgaacgg
ctgaagcagcagcagaggagcaaagccggcgcccccgctcaagctgcaccctcgaaagcc
gaacgccgcgccgaagcaaaagcaaaaggctacgaaggcgagatgtgctcggagtgcggc
aactttacactggtgcgcaacggcacctgcatgaagtgcgacacgtgtggatcgacgacg
gggtgttcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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