KEGG T01612: NECHADRAFT

Nectria haematococca: NECHADRAFT_43928

Entry

NECHADRAFT_43928 CDS T01612

Definition

hypothetical protein

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

nhe Nectria haematococca

Pathway

nhe03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:nhe03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT RNA_ligase mRNA_cap_enzyme DNA_ligase_IV

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 991 aa
MGSQQEQRPQTEDAKHEDEIQYGTVGITQEEMEEKYPNRPKNHSKTLVFSELFRELFNPL
SENKKQNATGAGPRKAFRGVNKLSPHEQRRHIIERFIIRWRKEVGPDFYPALRLILPDKD
RDRGVYGLKENAIGKLLVKLMKIDKSSEDGYNLLHWKLPGQTTASRLAGDFAGRCFEVIS
KRPMRTTVGTMTIAEVNEQLDKLAASTGETENLRIFETFYNHMNAEELMWLIRIVLKQMK
VGATEKTFLDLWHPDGDALFSVSSSLRRVCWELSDPEIRLEQDEAGVALLQCFQPQLAQF
QMPASFQKMIQLLRPTEEDPEFWIEEKLDGERMQMHMVEDKKHPGGRRFCFWSRKAKDYT
YLYGDGLQDENSSLTRHLKKAFASGVKNLILDGEMITWDMGVDKIVPFGTLKTAALAEQQ
NKSDTNSAGHRPLFRVFDILYLNNKPLTQYTLRDRHRALEKAVKSVHRRLEIHNYTSATT
SDAIEPLLREVVANASEGLVLKNPRSMYRLNHRNDDWLKVKPEYMSEFGESLDCVIIGGY
YGSGKRGGMLSSYLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRTEGKWI
EWDQKNPPSEYIELGGGELRQYERPDMWIRPKDSVVVSVKAASVGPSDQFARGFTLRFPR
FRRLRLDRTWDTALSLEEFQELKDRVDEESKEKAMTVEDRKRRNPKRIKRELVIAGEDSA
PVEFEGEKTKLFEGLEFCVLSEALKPYKKTKTQLESIIKENGGTISQRAAPGTNMVLIAD
KKVVKVASLMKGGDVDLIRPKWIKDCLEQDLGQFLLPFEESHLFHATEAMKRAAEQNTDQ
FGDSYARDMSIDELKDLMDCMPKIEDGEPFNKNEFLQQLEDHGKDLGNLRSFIFRRCVVL
FHGVDTGINRVSRLKHFVKYGGGSVTEDAGDLSVTHVVIEGGDPMQMGEAADMVRKELSS
RRTQPRVVAGKWIEDCWKEGTLLDEEQFVVP

NT seq 2976 nt +upstreamnt +downstreamnt
atgggaagtcaacaggaacaaagaccccagaccgaagatgcgaaacatgaagatgagatt
cagtacggcacagtaggaattacccaggaggaaatggaggaaaaatatccgaaccgccca
aagaatcactcaaagaccctagtcttctctgagctgtttcgagagttgtttaatccatta
agcgaaaacaagaagcaaaatgccaccggcgcaggccctagaaaggcattcagaggtgtc
aataagctctcaccccacgagcagcgacgacacattatcgagcgcttcatcattcgatgg
cgcaaagaagtcggtcccgatttctaccctgccctgcgtctaattctccccgacaaggat
cgcgatcgaggtgtttacggcctcaaggagaatgcaataggaaagctcctggtcaagttg
atgaagatcgacaagagctccgaggatggctacaatcttttgcactggaagttacctggt
caaaccactgcctctcgcctggctggcgactttgctggacgatgcttcgaggtcatttcg
aagcgcccgatgcgcacaactgtcggtaccatgacaatcgctgaggtcaacgagcagctg
gataagcttgctgcgtctacaggagagacagagaatctgcgtatctttgagactttctat
aaccacatgaatgccgaagagttgatgtggcttattaggatcgtcttgaagcagatgaag
gtcggcgccacggaaaagacctttttggatctctggcacccggacggcgacgccctcttc
agcgtgtcttcgagcttgagacgagtatgttgggaactttccgaccccgagattcggctc
gagcaggatgaggcgggcgttgccctcttgcaatgcttccaaccgcaacttgcccaattc
cagatgcctgcgtcttttcagaaaatgattcagcttctccgaccgacagaggaggaccct
gaattctggatcgaggagaagctggatggcgagcgtatgcaaatgcacatggtcgaggac
aaaaagcaccctggcggccgaaggttttgcttctggtcaagaaaggccaaggactacaca
tacctctacggcgacggacttcaagacgagaactcgagtttaacacggcatctcaagaag
gcctttgcatcaggtgtcaagaatctgattctggacggcgagatgattacctgggatatg
ggcgttgacaagatagtccctttcggcactctcaagacggccgctctcgcagagcagcag
aacaagtcggatacaaactcggctggtcaccgtcccctattcagggtctttgatatcctc
tacctcaacaataagcccttaactcagtataccctccgagatcgacaccgcgctctagaa
aaggccgtcaaatctgttcatcgacgtcttgaaattcacaactacaccagcgcaacaact
tctgatgctattgaaccacttctccgcgaagttgttgccaacgcgtcagaaggtctcgta
ctcaagaatcctcgttcaatgtaccgcctcaatcaccgaaacgacgattggctcaaggtc
aaacctgaatacatgtccgagttcggcgagtccctcgactgtgtcattatcggtggctac
tacggctcagggaagcgcggcggaatgctttcgagttatctgtgtggtctacgagtgaca
cagaaccacatccaagcgggcgcaaatcctgaaaagtgcttcagttttttcaaggtcgga
ggtggattccgtgccgaagactatgcagaaatccgacaccgaacagaaggaaagtggatt
gagtgggatcaaaagaacccgccctcagaatacatcgagcttggaggaggtgagctcaga
cagtatgaacggccagacatgtggattcgtcctaaagactcggtcgttgtttcagtgaaa
gcagcgagcgttggtccttcagaccagtttgctcgtggattcactttgcgcttcccacga
ttcaggcgtctccgtttggatcggacatgggacactgccctatccctagaggagtttcag
gagctgaaagatcgggttgatgaagagtcaaaagagaaggccatgacggttgaagacaga
aagagacggaatcccaaacgaatcaagagggagcttgttatagctggagaagattcagcg
ccggtcgagtttgagggcgagaagacgaagctttttgaagggttggagttttgcgtcctt
tctgaagctctgaagccctacaaaaagactaaaacccaactcgagtccattatcaaagaa
aacggaggtaccatttctcaaagagcggcaccaggtacaaacatggtgcttattgccgac
aagaaggtggtcaaagtggcgagtctcatgaaaggaggagacgtggaccttatccgtccc
aaatggatcaaagattgcctggagcaggatctgggacaatttctgctgccgtttgaggaa
tcacacttgtttcacgctacagaagcgatgaagcgcgcggcggagcagaacacggatcag
tttggagacagctacgctcgagacatgtccattgatgaactcaaggatctcatggactgt
atgcccaagatcgaggacggggagccattcaacaagaatgagtttctacagcagcttgaa
gatcacggcaaagatctgggcaacttgaggagctttattttccggcgctgcgtggtgttg
ttccatggggtggacaccggtatcaatcgggtctctcggttgaagcactttgtcaagtat
ggtggaggaagtgtcactgaggacgcaggcgacttatctgtgacacatgttgtgatagaa
ggaggagatccaatgcaaatgggtgaggcggccgatatggtgcgtaaggagctgagctca
agacgcacacaacccagggtggtggctggaaaatggatcgaggattgctggaaggagggc
acattgcttgatgaggagcagtttgtggttccatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-NHE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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