KEGG   Nitrosococcus halophilus: Nhal_0508
Entry
Nhal_0508         CDS       T01198                                 
Name
(GenBank) pseudouridine synthase, RluA family
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
nhl  Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:nhl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nhl03009]
    Nhal_0508
Enzymes [BR:nhl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     Nhal_0508
Ribosome biogenesis [BR:nhl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Nhal_0508
SSDB
Motif
Pfam: PseudoU_synth_2 S4 TGS
Other DBs
NCBI-ProteinID: ADE13694
UniProt: D5BW44
Position
complement(521987..522964)
AA seq 325 aa
MNSKEQSSTPRVRLVEIQLEQAGQRIDNFLLSQLKGVPKSRIYRCLRRGEVRVNKSRVAS
SYRLEQGDQVRIPPLRVSHPSVKEPVAPSLLHLIESSLLYEDKHLLILNKPAGIAVHSGS
SISYGVIETLRHLRPEAPFLELVHRLDRETSGCLMVAKTRSTLLALQSMQREQLIHKRYL
ALVKGRWPRNIGQVNLPLLKNILQSGERVVKVSATGKPAASHFHPKQLYKEATLMEITLE
TGRTHQIRVHAAHLGHPLGGDEKYGDPAFNKRLRNLGLRRLFLHADQLSFTPPEGKKLLK
ITAPLPEELSAVLKAYANKILTQQP
NT seq 978 nt   +upstreamnt  +downstreamnt
atgaacagcaaggaacaatcatcgacgccccgcgttcgcctcgtggaaatacaactggaa
caggcgggccaacgaatcgacaactttttactttcccaactcaagggcgttcccaagagc
cgaatctaccgttgcctgcgccgaggagaagttcgggtcaataaatcccgtgtcgctagt
agttaccgcctagagcagggggaccaagtcagaattcctccactgcgggtgtctcatccc
agcgttaaggaacccgtagccccttccctcttgcacctcatcgagagcagcttgttatat
gaggataagcatttgctcattctcaacaaaccggctggaatcgcggtccacagtggtagc
agtatcagctatggggttatcgagacattacggcacctgcgcccagaagccccttttctg
gagctcgtccatcgtttagaccgggaaacctcaggttgcctgatggtcgccaaaacccga
agcaccttgctggcactccagtcgatgcaacgggaacaactcatccataagcgctacctt
gcccttgtcaagggacgctggccaagaaatatcggacaagtaaacttgcccctgttaaaa
aatatcttacagtctggagaacgagtcgttaaggtgagcgccaccgggaaaccggctgcc
agtcatttccaccccaaacagctctataaggaagcgacgctgatggagatcactttggaa
accggtcgcacccatcagatccgggtgcatgccgcccatctcggtcatccccttgggggc
gatgaaaaatatggtgatcccgcattcaacaagcggctacgaaatttgggactgcgccgg
ttgtttctccatgctgaccagctaagctttacaccgcccgaaggaaaaaaattactcaag
ataaccgcgccactgcccgaggaattaagcgctgtactaaaagcatatgccaacaaaatt
ttaacccaacagccttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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