KEGG   Nitrospira japonica: NSJP_1480
Entry
NSJP_1480         CDS       T05001                                 
Symbol
rpsA
Name
(GenBank) 30S ribosomal subunit protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
nja  Nitrospira japonica
Pathway
nja03010  Ribosome
Brite
KEGG Orthology (KO) [BR:nja00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    NSJP_1480 (rpsA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:nja03011]
    NSJP_1480 (rpsA)
Ribosome [BR:nja03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    NSJP_1480 (rpsA)
  Bacteria
    NSJP_1480 (rpsA)
SSDB
Motif
Pfam: S1 Spt6_S1 S1_2 PCB_OB DUF2110
Other DBs
NCBI-ProteinID: SLM47652
UniProt: A0A1W1I3S5
Position
I:1422275..1423990
AA seq 571 aa
MSTVSKSSEQQLDRNALAALYEETFKNLEEGTITEGRVVALTKDKVVVDIGYKSEGMIPS
DQFAAEELQQLKVGDRLQVYIEECEDADGNLVLSKEKADKMKIWEELEKLYKEEKSIDGK
VVSRIKGGMMVDIGVKAFLPGSQIDLHPVRDLDGLVGRTFPMKIIKINHRRGNVVVSRRV
LLEETRDKKRQSTLATLKEGQLIQGMVKNITDYGAFIDLGGIDGLLHITDMSWGRVGHPS
EMFNVGDRVEVSVLKYDRETGRISLGLKQKSADPWTNVAGKYPIGTRVRGKVVSLTDYGA
FVELEPGVEGLVHVSEMSWTHEVRHPSRVVAIGDQVEAAVLNVDPASRKISLGMKQTAPN
PWDMVESKYPIGTRIEGKVKSLTDFGAFVGLDEGIDGLIHISDMSWTKHIKHPSELFKKG
QKVEAVVLRIDKEKERLSLGYKQLSRDPWDDEIPSRYRVGDSAAGKVSKVADFGIFIELD
GGVEGLIHVSEAGLDPSAKLEEKFKLQDDVAAKIIKVDRDERKIALSLRDHQLDSERRHV
EEYHAAQGAPDQSLGRAAKQSRKRAAQDDDK
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgagtacggtttcgaaatcgagtgaacagcagttggatcgcaacgccttggcggcgctg
tacgaagaaacgttcaagaatctcgaagagggcaccattacggagggccgggtcgtcgcc
ctgacgaaggacaaggtggtcgtcgacatcggctacaagtccgaggggatgattccgagc
gatcagtttgccgctgaagagctgcagcagctcaaagtcggtgatcgcttacaagtgtat
atcgaagagtgcgaagacgcggacggcaatctcgtcttgtccaaggaaaaagcggacaag
atgaagatttgggaggaattggaaaagctgtacaaggaagaaaagagcatcgacggtaag
gtggtctcccgcatcaagggaggcatgatggtggacatcggggtgaaggcttttctgccc
ggatcccagatcgacctccatccggtgcgcgatctcgatggattggtcggccgcacgttt
ccgatgaagatcatcaagatcaatcatcgccgcggcaacgtcgtggtgtcccggcgcgtg
ctgttggaggaaacgagagacaagaagcggcagtccaccctcgcgaccctcaaggagggg
cagctgattcagggcatggtcaagaacatcaccgattacggcgccttcatcgatctgggc
gggatcgacggcttgctgcacatcaccgacatgtcatggggacgagtcgggcacccctcc
gaaatgttcaacgtgggcgatcgggtcgaagtgagcgtgctgaaatacgatcgagagacc
ggtcggatttcgcttggtctgaagcagaagtcggccgatccttggacgaacgtcgccggc
aagtatccgatcggcacgcgcgtacgcggcaaagtggtgagtctgacggactacggcgca
ttcgtggaactggagccgggcgtggaggggctcgtgcacgtgtccgaaatgtcctggaca
catgaggtgcggcatccgtcgcgcgtcgtggcgatcggagaccaggtcgaagccgcggtg
ctgaacgtggatcctgccagccggaagatctcactgggcatgaagcagaccgcccccaat
ccgtgggacatggtcgagagcaagtatcccattggaaccaggatcgaagggaaggtcaag
agccttaccgatttcggggccttcgtgggtctggacgaaggcatcgacggcttgatccat
atttccgacatgtcctggaccaagcacatcaagcatccgtccgagttgtttaagaagggc
cagaaagtggaagcagtcgtgctccggatcgacaaggagaaggagcgactgtcactgggt
tataagcagctgagccgagacccatgggacgacgagattcccagccgctaccgggtggga
gattcggcagccgggaaggtgagcaaggtcgcggatttcggaatcttcatcgaactggac
ggcggagtagagggattgatccacgtcagcgaggcgggattggatcctagcgccaaactc
gaggagaagttcaaactgcaggatgatgtcgcggccaagatcatcaaggtggatcgtgac
gagcggaaaattgccttgagtctgcgggatcatcagttggattccgagcgccggcacgtg
gaagaataccatgcggctcaaggggcgccggatcagagcttgggtcgtgcggccaagcag
agccgcaagcgtgcggcgcaggacgacgacaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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