KEGG   Nitrospira japonica: NSJP_2118
Entry
NSJP_2118         CDS       T05001                                 
Name
(GenBank) Sigma-54 dependent DNA-binding response regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
nja  Nitrospira japonica
Pathway
nja02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nja00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NSJP_2118
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:nja02022]
    NSJP_2118
Two-component system [BR:nja02022]
 NtrC family
  HydH-HydG (metal tolerance)
   NSJP_2118
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 HTH_30 AAA Mg_chelatase Response_reg AAA_16 AAA_2 AAA_3 HTH_28 AAA_30 ATPase MerR MCM
Other DBs
NCBI-ProteinID: SLM48290
UniProt: A0A1W1I5M6
Position
I:complement(1999933..2001303)
AA seq 456 aa
MPPLLLVISSDPSTKTTLEKSVSDLPLILQFAPTPEEGLRVLGERTDFDCVIFDEHRQSR
PLNSILPQFRSLAPSIPVVVVGVEDSARAAVDALRSGAADYLVNPLTTSDVRTTLLRMQI
AAGADQASAAGSSGFDRIISVSSQMRLVKHLAAEVAATDATVLITGESGTGKELFAHAIH
AASPRAKGPFVALNCAGIPEHLMESELFGYQRGAFTDAKQPKLGRFQAAEGGTVFLDEIG
EVSPMAQAKLLRVLEDHVISPLGDTRDIPVDIRVVAATNEDLPAHIKAGKFRLDLYYRLN
VYQLRIPPLRERPDDIEPLVRHFLDTIRRDRGRRVPDFSPAAIEWLRRHDWPGNVRELHN
VVEGLTITCKSPTILPEHLPASFSNSGAPTPPAKADLPDGHARPSLLAFGLSLQDMEKKM
LMEALHEAGGNISEASRLLKLTRNTLRYRMAKYRLC
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgcctcctttgcttctcgtcatttcgagcgatccttcgacgaagacaaccctcgagaag
tccgtttcggacctgcctctgatcctgcagttcgctcccacgccagaggaaggccttcgc
gtactcggggaacggactgatttcgactgcgtcatcttcgacgagcaccgacagagccgg
cctttgaactctatccttccgcagtttcgaagcctcgccccctccattccggtcgtggtc
gtgggcgtcgaggattcggcacgggccgcggtggacgccttgcgatcgggagcggccgac
tatctggtcaacccgttgacgacatccgatgtccggacaacccttcttcgaatgcagatc
gcggccggtgccgaccaagcgtccgcggctggctcgtcgggtttcgatcggatcatcagc
gtgtcttcacagatgcgcctggtcaagcatctggcagcggaagtcgccgcgaccgacgcg
accgttttgatcaccggcgaaagcggaacaggcaaggaactgttcgctcatgccatccac
gccgcgagcccgcgagccaagggaccgttcgtcgcattgaattgcgcgggaatccccgag
caccttatggaatcggaactgttcggataccagcggggagccttcaccgatgccaaacaa
cccaagctcggacggtttcaagccgccgagggagggacggtgtttctggatgaaatcggc
gaagtcagccccatggctcaagccaagctcctgcgggttctcgaggaccacgtgatcagc
ccgctaggtgatacgcgcgacattccggtcgacattcgagtcgtcgccgcgaccaacgag
gaccttcccgcacacatcaaagcgggaaagtttcgtctggatctgtattaccggttaaac
gtgtatcagttgaggattccgcccttgcgggaacggcccgacgacatcgaaccgctggtg
cgacacttcctggacacgattcgtcgcgaccgcggtcgccgcgttccggatttcagtccc
gcagccatcgagtggctgcgccggcacgattggcccggcaacgttcgggaactgcacaac
gtcgtggaaggactgacgatcacgtgcaagagtccgacgatcctgcccgaacatctgccg
gcatctttttcgaactccggcgccccgacgccccccgccaaggcagatcttccggacggt
cacgccagaccttcgttgctcgcgttcggtctttccctgcaggacatggaaaagaaaatg
ctgatggaggcgctgcacgaggcgggagggaacatttccgaagccagccgccttctcaag
ctgacaagaaataccctgcgttatcgcatggccaagtatcgtctttgttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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