KEGG T02304: NKOR

Candidatus Nitrosopumilus koreensis: NKOR_06680

Entry

NKOR_06680 CDS T02304

Definition

succinate--CoA ligase

Orthology

K01903

succinyl-CoA synthetase beta subunit [EC:6.2.1.5]

Organism

nkr Candidatus Nitrosopumilus koreensis

Pathway

nkr00020	Citrate cycle (TCA cycle)
nkr00640	Propanoate metabolism
nkr00660	C5-Branched dibasic acid metabolism
nkr01100	Metabolic pathways
nkr01110	Biosynthesis of secondary metabolites
nkr01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:nkr00020]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:nkr00640]
Metabolism; Carbohydrate metabolism; C5-Branched dibasic acid metabolism [PATH:nkr00660]

SSDB

Motif

Pfam:

ATP-grasp_2 ATP-grasp_5 Ligase_CoA CPSase_L_D2 ATP-grasp_4 DUF362 ATP-grasp DUF4152

Other DBs

NCBI-GI:

407462834

NCBI-GeneID:

13725361

UniProt:

K0B6U0

Position

1112541..1113647

AA seq 368 aa
MQLLEYQAKELFREYGINLLDSISSTNIEEGRKHAKELGYPFVIKIQVPVGGRGKAGGIQ
KCQNDDEFEIKYPQVMDLTIKGEKARAILLEKMADIKKELYLSIFLNRSKRCYTIIASAE
GGVEIESVKNQIIKEIGLGEVSDELAKEVAKEMGLEGKHAEGVIDTLKKLSKLTIEKEAE
LVEINPLAIMQDDTIMALDGKFVTDDNSNFRHPELEKYQEKTAIEEQAEKSGFSLVELDG
DVAVVGNGAGLVMSTLDMLSDNGGKPACFLDVGGGATTESVYEALTLISKLNRVKGILVN
LYGGIVKTTVVAEAFLKAYEDNVIDLPVFCRLKGTESEKATEMLQGSRTKIFGTVEEAIN
AAVMGVKK

NT seq 1107 nt +upstreamnt +downstreamnt
atgcaattattagaataccaggcaaaggaattattccgtgaatacggcatcaacctatta
gacagtatttcatctaccaatattgaagagggtagaaagcatgcaaaagagctaggatat
ccatttgtgatcaaaattcaggttccagtaggaggtagaggaaaagcaggaggaatccaa
aagtgtcaaaatgatgatgaatttgagataaaatatcctcaagttatggacttgacaatc
aagggagaaaaagcaagagcaattcttcttgagaagatggcagatatcaaaaaagagctt
tatctttcaatatttttgaatcgttcaaaaagatgttacacaattattgcatctgctgaa
ggaggagttgaaattgaatcagtgaaaaatcagattatcaaagagataggattaggggaa
gtttcagacgaacttgcaaaagaagtagcaaaagaaatgggattagaaggaaaacatgca
gaaggagttatagatacattgaaaaaattatcaaaactcacaatcgaaaaggaagcagaa
cttgtagaaattaatccactagcaatcatgcaagatgacacaattatggcattagatgga
aaatttgttacagatgacaatagtaatttcagacacccagaattagaaaaatatcaagaa
aaaacagcaattgaagaacaagctgagaagagtggattttcattagtagaattagatgga
gatgtcgcagttgttggaaatggtgcaggacttgtaatgtctacactagatatgttatca
gacaatggaggaaaaccagcatgtttcttagatgttggtggtggcgcaacaactgaatca
gtatacgaagcattaactttgattagtaaattaaacagagtaaaaggaattttagtaaat
ctctacggtggaattgtgaaaacaacagtagttgctgaagcatttctaaaggcatatgaa
gacaatgtaattgatttgccagtattttgtagattaaagggaacagaatctgaaaaagca
acagaaatgctacaaggttctagaaccaaaatttttggcacagttgaagaagcaattaac
gcagcagtgatgggtgtaaagaaatga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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