KEGG   Nitrosospira lacus: EBAPG3_009930
Entry
EBAPG3_009930     CDS       T04907                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
nlc  Nitrosospira lacus
Pathway
nlc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nlc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EBAPG3_009930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nlc03400]
    EBAPG3_009930
DNA repair and recombination proteins [BR:nlc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EBAPG3_009930
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EBAPG3_009930
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 AAA_22 Kinesin AAA_18
Other DBs
NCBI-ProteinID: ARO88063
UniProt: A0A1W6SQJ5
Position
2203674..2205755
AA seq 693 aa
MIITFPNSPYKLHQSFSPAGDQPEAIDKLMEGIEDGLAFQTLLGVTGSGKTFTMAHVIAR
LGRPAIIMAPNKTLAAQLYAEMREFFPENAIEYFVSYYDYYQPEAYVPSRDLFIEKDSSI
NEHIEQMRLSATKALLERDDAIIVATVSCIYGIGDPVDYHGMILHLRENEKITQREAIQR
LIEMQYERNEFEFGRGTFRVRGDVLDIFPAESSETAVRVSLFDDIVESMVLFDPLTGRTL
KQVSRYTVYPSSHYVTPRSTTLRAIGTIKDELRERIDFFQKNHKLVELQRIEQRTRFDLE
MLNELGFCKGIENYSRHLSGKKPGQPPPTLIDYLRPDTLMVIDESHVTIPQVGGMYKGDR
SRKENLVEYGFRLPSALDNRPLRFDEFRKMMPQTVFVSATPAEFERVHSGQVVEQVVRPT
GLVDPQIEIRPATTQVDDLMSEVGLRTAKGERVLVTTLTKRMAEDLTDYFSDHGIKVRYL
HSDIDTVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLI
QTIGRAARHINGTALLYADKITDSMRRAMDETERRRNKQILFNLEHGITPRSVHKRVKDL
IDGVYNIETAQQHLKAAQVQARYDSMSEVQLAKEIKLLEKQMLDAAKNLEFEQAAQYRDE
LKRLKNKLFVGFVEPEPEVSREKTEPALRKVNK
NT seq 2082 nt   +upstreamnt  +downstreamnt
gtgatcattacctttcccaatagcccctacaagctgcatcaatcgttttcccctgctggt
gatcagcctgaagccatcgacaagctgatggaagggatagaggacggccttgcgttccag
acgctgctgggcgtgacgggctccggcaagacttttaccatggcccacgtaattgcacgg
cttggccgccccgcgatcatcatggcaccgaacaaaacgctggcggctcagctctacgca
gaaatgcgcgagtttttccctgaaaacgccatcgagtactttgtctcctattacgactat
tatcaaccggaggcctatgtcccttcgcgcgacctgttcatcgagaaggattccagcatt
aacgaacacatcgagcaaatgcgcctgtccgccaccaaggcactgcttgagcgggatgat
gccataattgtcgccaccgtatcatgcatatacggtatcggcgacccagtggattatcac
ggcatgattctgcatctgcgcgaaaatgaaaaaatcacccagcgcgaagccatacaacgc
ctgattgaaatgcagtatgagcgcaatgagtttgagttcggccgtggaaccttcagggtg
aggggtgacgtgctcgacatatttccggcggaaagttcggaaaccgcggtgcgcgtctcg
ctgtttgacgatattgtcgaaagcatggtgttgttcgatcctctcaccggacgcacgctg
aagcaagtatcgcgctatacggtttatccctccagccactatgtaacgcctcggagcact
acgttgcgcgccatcggtaccatcaaggacgaactgagagagcgcatcgattttttccag
aaaaaccataagctcgtggagctgcaacgtatcgaacagcgcactcgctttgatctggaa
atgctcaatgaactgggtttctgcaaaggcatcgaaaattactcgcggcacctttcgggg
aaaaaaccggggcagccgccgcctactctgatagattatctgcgccccgatacgctgatg
gtgattgatgagagccatgtgaccatcccgcaggtgggtggaatgtacaagggagatcgt
tcccgcaaggaaaatctggtggaatatggctttcgcctgccttccgcactggataaccgg
ccattgcggttcgatgaattcaggaaaatgatgccgcaaacggtatttgtctccgcaacc
cctgcggagttcgagcgtgtgcacagtggccaggtggtggaacaggttgtgcgccccacc
ggtctggtggaccctcagatcgagattcgtcccgcaactacccaggtcgacgacctcatg
tcggaagtcggcctgcgcactgcaaagggcgagcgggtgttggtgacaacgctgaccaag
cgcatggccgaggatttgaccgattatttttccgatcatggcatcaaagtgcgctacctc
cattccgatatcgataccgtggagcgggtggagatcattcgtgatttgcggctgggaaaa
ttcgacgtgctggtgggtatcaatcttctgcgggaaggattggacattccggaagtgtcg
ctggtagcgatactggatgccgacaaggaaggatttctgcgttccgaacgctcactgatc
cagacgataggccgggcagcgcgccatatcaatggcactgcgcttctctacgccgataag
attaccgattccatgcgtcgcgccatggatgaaaccgagcggcggcgcaataaacaaatc
ctgtttaatcttgagcatggcattacgccgcgaagcgtgcacaaacgtgtcaaggatttg
atcgatggcgtttacaacattgaaaccgcgcaacagcatttaaaggcggcacaggtacaa
gcccgttatgattccatgagcgaggtgcaactggcgaaagaaatcaagctgctggaaaag
cagatgctggatgcagcaaagaatcttgaattcgagcaagcagcgcaatatcgtgatgag
ttaaaaagattaaaaaacaagctgttcgtaggatttgttgaacctgaacctgaggtaagc
cgggaaaagacagaaccggccctcaggaaggtgaataaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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