KEGG N.meningitidis: NMB0132

Neisseria meningitidis MC58 (serogroup B): NMB0132

Entry

NMB0132 CDS N.meningitidis

Gene name rpoB

Definition DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)

Orthology K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]

Pathway nme00230 Purine metabolism
nme00240 Pyrimidine metabolism
nme01100 Metabolic pathways
nme03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:nme00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:nme00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:nme03020]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45
RNA_pol_Rpb2_1 RNA_pol_Rpb2_2
PROSITE: RNA_POL_BETA NLS_BP

Other DBs NCBI-GI: 15676060
NCBI-GeneID: 902240
JCVI-CMR: NMB_0132
UniProt: Q59622

Position 137034..141218

AA seq 1394 aa
MCMNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENAFDKRTDDGLQAAFN
SIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTV
KEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSA
RIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSS
NGVQTDLVADRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDITNAGLTRLDVEPESLL
GKALAADLIDSETGEVLASANDEITEELLAKFDINGVKEITTLYINELDQGAYISNTLRT
DETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQK
LSEAQQNSWYGRLLNETFAGAADKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNR
RVRSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQL
SQFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGL
INSLSVYARTNDYGFLETPYRRVIDGKVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIG
DLVTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVP
CLRPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIY
NLVKFTRSNQSTNINQRPAVKAGDVLQRGDLVADGASTDFGELALGQNMTIAFMPWNGYN
YEDSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIV
YIGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDV
QVFTREGIQRDKRAQSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKL
AKGSEITTEYLAGLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLT
QGDELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIV
LNPLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKED
LDALTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKT
QITLYDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQ
RFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
EIRSLGLDIDLERY

NT seq 4185 nt +upstreamnt +downstreamnt
gtgtgtatgaactattcgtttaccgagaaaaaacgtatccgtaagagttttgcaaagcgg
gaaaatgttttggaagttcctttcttgctagcaacccaaattgattcttatgcgaagttt
ttgcagctggaaaatgcttttgacaaacgtaccgatgacggtctgcaggcggcatttaat
tctattttcccgattgtgagccataacggttatgcgcgattggagtttgtgcattacaca
ttgggcgagcctttgttcgatattcccgaatgtcagttgcgcggaatcacttatgcagcc
cccttgcgcgcgcgtatccgtttggtgattttggataaggaagcatctaaaccgacggta
aaagaagttcgtgaaaacgaagtgtatatgggcgaaattccgttgatgaccccgagcggt
tcttttgtgattaacggcacagagcgtgtgattgtctcccagttgcaccgttcgcccggc
gtattcttcgagcatgacaaaggtaagacgcactcttccggcaaattgttattctccgcc
cgcatcattccctaccgtggttcatggttggattttgaatttgatccgaaagatttgctg
tatttccgtatcgaccgccgccgtaaaatgccggtaacgattttgttgaaggctttaggc
tacaacaatgagcaaatcttggatattttctacgacaaagaaacgttctatttgtcttca
aacggtgttcaaaccgatttggttgcagaccgtctgaaaggcgaaactgccaaggtcgat
atcttggataaagaaggcaatgtattggttgccaaaggtaagcgcattactgcgaaaaat
atccgtgatattaccaatgcaggcctgacccgtttggatgtagaaccggaaagcctgctg
ggcaaagcattggctgccgatctgattgattcggaaaccggcgaggtattggcttctgcc
aatgatgaaattacagaagagttgttggccaaatttgatatcaacggcgtaaaagaaatt
acgaccctttatatcaatgagctggatcagggtgcttatatctccaataccttgcgtacg
gatgagactgccggccggcaggcggctcgtgttgcgatttaccgtatgatgcgtccgggc
gaaccgcccaccgaagaggcggtcgagcaattgtttaaccgcttgttcttcagtgaagac
agctacgatctgtcccgcgtaggccgtatgaaatttaatacgcgcacatacgaacaaaaa
ctgtccgaagcccaacaaaactcttggtacggccgcctgctgaacgaaacgtttgccggt
gctgccgacaaaggcggttatgtcctgagcgtcgaagatattgtcgcctcgattgcgact
ttggtcgagttgcgtaacggccatggcgaagtggacgatatcgatcacttgggcaaccgc
cgagtacgttcggtaggcgagctgactgaaaaccaattccgtagcggtttggcccgtgtg
gaacgtgccgtaaaagaacgtttgaatcaggcggaatcagaaaacttgatgccgcacgat
ttgattaatgcaaaacctgtttctgccgctattaaagaattcttcggctccagccaattg
agtcagtttatggatcagaccaaccccttgtctgaagtaacccataaacgccgtgtatct
gcattgggtccgggcggtttgacccgcgaacgtgcaggatttgaggtgcgggacgtgcat
ccgacccactacggtcgcgtatgtccgattgaaacgcctgaaggtccgaacatcggtttg
atcaactcattgtccgtttatgcgcgcaccaatgattacggtttcttggaaacgccttac
cgccgcgttatcgacggcaaagtaaccgaggaaatcgattacttgtctgccatcgaagaa
ggccgctatgtgattgcacaggcgaatgccgatttggattcagatggcaatctgattggc
gatttggttacctgtcgtgaaaaaggcgaaaccattatggcaacgcccgaccgcgtccaa
tatatggacgtggcaactggtcaagtggtatccgttgcagcatccctgattccattcttg
gaacatgatgacgcgaaccgcgcattgatgggtgccaacatgcaacgtcaggcagtgcct
tgcttgcgtcctgaaaaaccgatggtcggtaccggtatcgagcgttccgttgccgttgac
tctgctactgcaatcgttgcccgccgaggcggcgtggtcgagtatgtcgatgccaaccgc
gttgtgatccgtgtccatgacgacgaagcgactgccggtgaagtgggtgtcgatatttac
aacttggttaaattcacccgttccaaccagtctaccaatatcaatcagcgtcctgccgtc
aaagccggcgatgttttgcaacgcggcgatttggtggccgacggcgcgtccaccgatttt
ggcgaattggctttgggtcaaaatatgaccatcgccttcatgccgtggaacggttacaac
tacgaagactcgattctgatttccgaaaaagtggctgcggacgaccgctatacttcgatt
cacattgaggaattgaatgtcgttgcccgcgatactaagctgggtgcggaagacattacc
cgcgatattccgaacttgtccgagcgtatgcaaaaccgtttggacgaatccggtatcgtt
tacatcggtgcggaagtagaagccggcgatgtgttggtaggcaaggtaacgcctaaaggc
gaaacccaactgacgccggaagaaaaactgctgcgcgccatcttcggtgaaaaagcatct
gacgtaaaagatacttcattgcgtatgcctaccggcatgagcggtaccgttatcgacgtt
caagtcttcactcgtgaaggtattcaacgcgacaaacgtgctcaatccattatcgattcc
gaattgaaacgctaccgtttggatttgaacgaccaattgcgtattttcgacaacgacgca
ttcgaccgtatcgagcgtatgattgtcggtcagaaagccaacggtggtccgatgaagctg
gccaaaggcagcgaaatcacgaccgaatatctggcgggtctgccgagcaggcacgattgg
ttcgatatccgtctgaccgatgaagatttggccaagcagttggaactgattaaagtgagc
ctgcaacaaaaacgcgaagaagcggacgagttatacgaaatcaagaagaaaaaactgacc
caaggcgacgaattgcaacccggcgtacaaaaaatggtgaaagtttttatcgccatcaaa
cgccgtctgcaagccggcgacaaaatggcgggccgccacggtaacaaaggcgtggtatcg
cgcattctgccagtggaagacatgccttacatggcggacggccgtccggtagacatcgta
ctgaacccattgggcgtaccttcccgtatgaacatcggtcagattttggaagttcacttg
ggttgggcagcaaaaggtatcggcgagcgtatcgaccgtatgctgaaagagcaacgcaaa
gcaggcgagttgcgcgagttcttgaacagactctacaacggcagcggtaagaaagaagat
ttggatgccctgactgatgaagaaatcatcgaactggcctccaacctgcgcaaaggtgca
tctttcgcctctcctgtattcgacggtgcgaaagagtctgaaatccgcgaaatgctgaac
ttggcttatccgagcgacgatcctgaggttgaaaaactgggcttcaacgacagtaaaacc
caaatcacgctgtatgacggccgttcaggcgaagcatttgaccgcaaggttacagtaggt
gtgatgcactatctgaaactgcaccacttggttgacgaaaaaatgcacgcgcgttctacc
ggtccgtacagtctggttacccagcagcctttgggcggtaaagcccagttcggcggccaa
cgtttcggcgagatggaggtttgggcattggaagcatacggcgcggcatacacgctgcaa
gagatgctgactgtgaagtctgacgacgtgaacggccgtaccaaaatgtacgaaaacatc
gtcaaaggcgaacacaaaatcgatgccggtatgcccgagtccttcaacgtattggtcaaa
gagattcgctcactgggcttggatatcgatttggaacgttactaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (6)   
   PROSITE (2)   
All databases (23)

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