KEGG N.meningitidis: NMB0133

Neisseria meningitidis MC58 (serogroup B): NMB0133

Entry

NMB0133 CDS N.meningitidis

Gene name rpoC

Definition DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)

Orthology K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]

Pathway nme00230 Purine metabolism
nme00240 Pyrimidine metabolism
nme01100 Metabolic pathways
nme03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:nme00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:nme00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:nme03020]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3
RNA_pol_Rpb1_4 Apocytochr_F_C Peptidase_M23 Biotin_lipoyl
Ribosomal_L27 ApbA_C

Other DBs NCBI-GI: 15676061
NCBI-GeneID: 902241
JCVI-CMR: NMB_0133
UniProt: Q9K1J1

Position 141375..145550

AA seq 1391 aa
MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA
KMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI
MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIRE
HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYH
TKQVELGTKITVRLREWVKNEAGEFEPVVNRYETTVGRALLSEILPKGLPFEYVNKALKK
KEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEAN
AEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQES
FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDR
ILGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHC
YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA
RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTL
ATWDPHTRPMITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRP
TVKLLDENGVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITG
GLPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQIL
VHDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVII
RQMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQEVE
QETAETQVTDE

NT seq 4176 nt +upstreamnt +downstreamnt
atgaatttgttgaacttatttaatccgttgcaaactgccggcatggaagaagagtttgat
gccattaaaatcggtattgcctctcccgaaaccatccgctcatggtcttatggcgaagtc
aaaaaacctgaaaccatcaactaccgtacgttcaaacctgagcgtgacggtttgttctgt
gccaaaatctttggcccggtcaaagactacgaatgcttgtgcggaaaatacaaacgcttg
aaatttaaaggcgtaacgtgtgaaaaatgcggcgtggaagtaaccctgtccaaagtgcgc
cgcgaacgcatgggtcatatcgaattggctgcgcccgtcgcacatatttggttcttaaaa
tccctgccttcccgcttgggtatggtgttagacatgactttgcgcgacatcgagcgcgta
ttgtactttgaagcatttgtggtaaccgatcccggtatgactccgctgcaacgccgccaa
ttgctgactgaagacgattactacaacaagctggacgaatacggcgacgatttcgatgcc
aaaatgggtgcggaaggtatccgcgaattgctgcgtaccctgaatgtagcgggcgaaatc
gaaatcctgcgccaagagttggaatcgaccggttccgacaccaaaatcaaaaaaatcgcc
aaacgcttgaaagtattggaagccttccatcgttccggtatgaaactggaatggatgatt
atggatgtgctgccggtattgccgcctgatttgcgtccgttggttccattggatggtggt
cgttttgccacttccgatttgaacgatttgtaccgccgcgttattaaccgtaacaaccgt
ctgaaacgtctgttggaactgcatgcgcctgacatcatcgtccgcaacgaaaaacgtatg
ttgcaagaagcagttgactcgctgttggataacggccgtcgcggtaaagccatgaccggc
gccaacaaacgcccgctgaaatcattggcagacatgattaaaggtaaaggcggtcgcttc
cgtcaaaacctgttgggcaaacgtgtggactactccggccgttccgtgattaccgtaggc
ccgtacctgcgtctgcaccaatgcggtttgccgaaaaaaatggctttggaactgttcaaa
ccgttcattttccacaaattggaaaaacaaggtttggcctctaccgttaaagcagcgaaa
aaattggtagagcaagaagtaccggaagtatgggacatcttggaagaagtcatccgcgaa
catccgattatgctgaaccgtgcgccgaccctgcaccgtttgggtattcaagcgttcgaa
cctatcttgattgaaggtaaagcgattcagttgcacccattggtgtgtgctgcgttcaac
gccgactttgacggcgaccaaatggcggtacacgttccattgagcttggaagcacaaatg
gaagcacgcacgctgatgctggcttcaaacaacgtattgtctccggccaacggcgaaccg
attatcgtaccttcccaagacatcgtattgggcctgtactatatgactcgcgatcgtatc
aatgccaaaggcgaaggcagcctgtttgccgatgtgaaagaagtgcatcgcgcataccat
accaaacaggtcgagctgggtacgaaaatcaccgtacgtctgcgcgaatgggtgaaaaac
gaagcaggtgagtttgagcctgtcgttaaccgttacgaaacaaccgtcggccgtgcattg
ttgagcgaaatcctgccgaaaggcctgccgtttgaatatgtcaacaaagcgttgaagaaa
aaagaaatttctaaactgattaacgcatcgttccgcctgtgcggcttgcgcgatacggtt
atctttgctgaccacctgatgtacaccggtttcggatttgcggcaaaaggcggtatttcc
attgccgttgacgatatggaaattccaaaagaaaaagcggccttgctggctgaagccaat
gccgaggttaaagaaatcgaagaccaataccgtcaaggtttggttaccaacggcgaacgc
tacaacaaggtggtcgatatttggggtcgtgccggcgataagattgctaaagcgatgatg
gacaacttgtccaaacaaaaagttatcgaccgtgccggcaacgaagtcgatcaagagtca
ttcaactccatttatatgatggcggactccggtgcccgtggttctgcagctcagattaaa
cagttgtccggtatgcgtggcttgatggcaaaacctgacggctcgattattgaaacgccg
attacctcaaacttccgtgaaggtctgaccgtattgcaatactttattgcgacccacggt
gcgcgtaagggtttggcggataccgcattgaaaaccgcgaactccggttacctgactcgt
cgtctggtagacgtaactcaagatttggtcgttgttgaagacgattgcggtacttcagac
ggctttgtcatgaaggcagtggtacaaggcggtgatgtgattgaagcattgcgcgatcgt
attttgggtcgtgttaccgcgtctgacgttgtcgatccgtcaagtggcgaaaccttggtt
gaagccggtacgttgctgactgaaaaactggtggatatgatcgaccaatccggtgtcgat
gaagtcaaagtccgtacgccgattacttgtaaaacccgtcacggcctgtgtgcacactgt
tacggtcgtgacttggcacgcggcaaactggttaacgccggtgaggcagtcggtgtgatt
gctgcacaatccattggcgaaccgggtacccagttgaccatgcgtacgttccacatcggt
ggtgcggcatcccgtgcggcagcagccagccaagtggaagccaaatccaacggtacggca
cgattcagcagccagatgcgctacgttgccaacaacaaaggcgagttggttgtcatcggc
cgttcttgtgaagtcgtgattcacgacgatatcggccgtgaacgcgaacgccacaaagta
ccttacggtgccatcctgctggtacaagacggtatggccattaaagccggtcaaaccttg
gcaacctgggatccgcatacccgtccgatgattaccgaacacgcaggtatggtgaaattc
gaaaacgtggaagagggcgttaccgttgccaaacaaaccgatgatgtaaccggtttgtcc
actttggtggtgattgacggtaaacgtcgttcctctagtgcttccaaactgctgcgtccg
actgtgaaactcttggacgaaaacggcgtggaaatctgtattcccggtacttctactccg
gtatccatggcattccccgttggtgcggtgattaccgtacgcgaaggtcaggaaatcggt
aaaggcgacgtattggcgcgtattccgcaagcctcttccaaaacccgcgacattaccggc
ggcctgccgcgcgttgccgaattgtttgaagcacgcgtgccgaaagatgccggtatgttg
gcggaaattaccggtaccgtttccttcggcaaagagaccaaaggcaagcaacgtctgatt
gttactgacgtggacggtgtagcatacgagaccttgatttccaaagagaaacaaattctg
gtacacgacggtcaagtggtaaaccgcggtgaaaccatcgtggacggcgcggtcgatccg
cacgatattctgcgtttgcaaggtatcgaagcactggcacgctacattgtccaagaggtg
caagaggtttaccgtctgcaaggtgtgaagatttctgataaacacatcgaagtcatcatc
cgtcaaatgttgcgccgtgtgaacattgcggatgccggcgaaaccgggttcattaccgga
gagcaggtcgaacgcggcgatgtgatggcggccaatgaaaaagctttggaagaaggcaaa
gaaccggcgcgttacgaaaacgtattgctgggtattaccaaagcttccctgtccaccgac
agcttcatttctgccgcatcgttccaagaaacgacccgcgttctgaccgaagccgcgatt
atgggcaaacaagacgagttgcgtggtttgaaagaaaacgtcatcgtcggtcgcttgatt
cctgccggtaccggtttgacttaccaccgcagccgtcatcaacaatggcaagaggtggaa
caggagactgccgaaacccaagtaacggatgaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (25)

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