KEGG   Natrialba magadii: Nmag_0608Help
Entry
Nmag_0608         CDS       T01176                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nmg  Natrialba magadii
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:nmg00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Nmag_0608
   03410 Base excision repair
    Nmag_0608
   03420 Nucleotide excision repair
    Nmag_0608
   03430 Mismatch repair
    Nmag_0608
Enzymes [BR:nmg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Nmag_0608
    6.5.1.6  DNA ligase (ATP or NAD+)
     Nmag_0608
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Nmag_0608
DNA replication proteins [BR:nmg03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Nmag_0608
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Nmag_0608
DNA repair and recombination proteins [BR:nmg03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Nmag_0608
   NER (nucleotide excision repair)
    Other NER factors
     Nmag_0608
   MMR (mismatch exicision repair)
    Other MMR factors
     Nmag_0608
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
complement(600229..602061)
Genome map
AA seq 610 aa AA seqDB search
MEFATFADRAATIEAESADLEIVAHVRDLLAEAGDDLPIVARFVQGRVFPAWDSTTLDIG
PNTCYEAIARAAGTNVDADDVEERLADRGEIGAVAASYDFGGQQGLGAFMSGGGSGAGGA
VDNNDDQDDRNNGGNGSNSGNDSNSSNDSNSSNGTGDLTVREINDTLTDLAAAEGSGSQD
RKVDLLFGLFNRCSSDEARYLARLVLSEMRIGVGEGTVRDAIAEAFEVPQEPVERALQVS
NDYGQVAETAREDGVDGLDEIDLEIGRPVQAMLAQAGTVTDALEEWDEAAVEWKYDGARI
QLHYDPAGPGGPDGDSNGETHVFSRNMEAVTDALPEVVEFADEHLDGPAILDGEVVAIDD
DGNPLPFQEVLKRFRRKHDVAKARENVSVRPVFFDCLHADGDDLLEEPLVERHNQLESVL
AMGPQQEPEEIDGFSLLWVTDNPDEIEAVDADALEAGHEGIMLKNPDSAYSPGRRGKNWQ
KRKPDVETLDCVVTGAEWGEGRRATFLGTFELSVRDGDDLETVGKVATGITDEKLEELTE
LLEPHIVAEDGTAVELEPAVVFEVGYEEIQTSPTYSSGYALRFPRFLGVRYDKDTAGAET
LERLETLFES
NT seq 1833 nt NT seq  +upstreamnt  +downstreamnt
atggagttcgccacgttcgcagaccgcgccgccacgatcgaggccgaatccgcggatctc
gagatcgttgcccacgtccgcgacctgctcgcagaggccggcgacgatctcccaatcgtc
gcccggttcgtccagggccgggtcttcccagcctgggactcgaccacgctcgatatcggg
ccaaacacctgctacgaggctatcgcccgtgcagcggggacgaacgtcgacgcagacgac
gtggaggagcgactcgccgaccgcggcgaaatcggtgcggtggcggcgagctacgacttc
ggcggccagcaggggttgggtgcgttcatgagcggcggtggcagtggcgctggtggtgct
gtcgacaacaatgacgaccaggacgaccgcaacaacggcggcaacggcagcaacagcggc
aacgacagcaacagcagcaacgacagcaacagcagcaacggcaccggcgacctcaccgtc
cgcgaaataaacgacacccttaccgacctcgcggccgccgaaggctcgggcagccaagac
cggaaggtcgacctcctcttcgggctgttcaaccgctgctcgagcgacgaagcgcgctac
ctcgctcgcctcgtcctctccgaaatgcgcatcggcgtcggcgagggtaccgtccgggac
gccatcgccgaggccttcgaggttccccaagagccggtcgaacgcgcactccaggtctcg
aacgactacggccaggtcgcggaaaccgcccgcgaggacggcgtcgacggactcgacgag
atcgacctcgagatcggtcgcccagtccaggccatgctcgcgcaggcggggacggttacg
gatgcactcgaggagtgggacgaggctgcggtcgagtggaagtacgacggggcgcgaatc
cagttacactacgatccagcaggccctggcggtccagacggcgacagcaacggcgagacg
cacgttttctcccggaacatggaagcggtcaccgacgcactcccggaggtcgtcgagttt
gccgacgaacacctcgacggccccgcgattctggacggcgaggtcgtcgcgattgacgac
gatggcaaccccttgccgtttcaggaggtgctcaagcgcttccggcgcaagcacgacgtg
gcgaaagcccgcgaaaacgtctctgttcgcccagtcttcttcgactgtctccacgccgac
ggcgacgacctcctcgaggagccactggtcgagcgacacaaccaactcgagtcggtgctc
gcgatgggcccccagcaagaacccgaagagatcgacggcttctcgctgctgtgggtcacc
gacaaccctgacgaaatcgaggccgtcgacgcggacgcactcgaggccggccacgagggg
ataatgctcaagaaccccgattcagcgtactcgccgggccggcgcggaaagaactggcag
aagcgcaaaccggacgtcgagacgctcgactgcgtcgtcaccggtgcggagtggggcgag
ggacggcgggcgacgttcctcgggacgttcgagctctcggttcgcgacggcgacgacctg
gaaacggtcggcaaggtcgcgacgggcatcacggacgagaaactcgaggaattgacggaa
ctgctggaaccccacatcgtcgcggaggacggaacggcggtcgaactcgagccggccgtc
gttttcgaggttggctacgaggagatccagacgtcgccgacgtactcgtcgggctatgca
ctgcgattcccgcgattcctgggtgtacgatacgacaaggatactgcgggagcggagacg
ctcgagcgactcgagacgctgttcgaatcgtag

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