KEGG   Nitrospira moscoviensis: NITMOv2_2096
Entry
NITMOv2_2096      CDS       T04041                                 
Symbol
rnd
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
nmv  Nitrospira moscoviensis
Brite
KEGG Orthology (KO) [BR:nmv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nmv03016]
    NITMOv2_2096 (rnd)
Enzymes [BR:nmv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     NITMOv2_2096 (rnd)
Transfer RNA biogenesis [BR:nmv03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    NITMOv2_2096 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: ALA58513
UniProt: A0A0K2GC38
Position
complement(1959433..1960623)
AA seq 396 aa
MSRHPHYITSREALHELCGHLKGSRRLALDTEFVGEDSFVPKLELIQVATETTAAVIDFP
AVQAEGPLDMLWDIIRNPAIQKVVHAGRQDLDLFAVHAGEIPKPFFDTQIAAAMVGFGAQ
VAYSNLVQRVHGTKLAKAHTFTNWSARPLSPDQLAYALEDVTFLLAIHDHLHGRLSRLGR
LEWVHEEFSRLEGAVADTRREPQERYQRVRGWDTLKPKSAAVLRELAAWREGEAKRRNVP
RGRVMRDEVLLQLARHPPRHLHELRVVRGLHGSEVDRNGEAILGTIQAALALPPSAWPEV
PKERKPEPESAGLVEFLQAVMKARALEEEIAPALLATTADLQALVDAKDRTQLDLPLLKG
WRRELLGDTLLRLLEGKLSVRIDPASGTLICADRST
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgtcccgacaccctcactacattacgagccgggaggctctccacgagctgtgcggccac
ctcaagggcagccggcggctggctctggataccgagttcgtcggcgaagacagttttgtg
ccgaagctcgaattgattcaggttgcgacggagacgaccgcggcggtgattgattttccg
gcggtgcaggccgagggtccactcgatatgctctgggacatcatccgcaatccggccatc
cagaaggtggtgcatgccggccggcaggatttggatctcttcgccgtccatgccggagaa
attcccaaaccgtttttcgatacgcagatcgccgccgccatggtcggcttcggcgcgcag
gtggcctattccaacctggtgcagcgggtccacggcaccaagctggccaaggcccatacc
tttacgaattggagcgcccggcccctctcccccgatcagctggcctatgcgctggaggac
gtgacctttctcctggcgatccatgaccacctgcacggacgcctgtccagactgggacgg
ctggaatgggttcatgaagaattttcgcgtctggaaggcgcagtggccgacacgagacgt
gagccgcaggaacggtaccagcgggtccgcggctgggatacgctgaaaccgaaatcggcc
gccgtgctccgcgagttggcggcgtggcgggaaggggaggcgaagcgccgcaacgtaccg
cgcggccgcgtgatgcgcgacgaggtgttactgcaactggcccgccatccgccgcgccat
cttcacgagttgcgcgtcgtgcgcggtctgcatggatcggaggtcgatcggaacggggag
gcgatccttggcaccatccaggcggcattggccctgccgccgtcggcttggcccgaggtg
ccgaaagagcgcaaacccgagcccgagtccgccggtttggtggagttcctgcaagccgtg
atgaaagcccgcgcgctggaggaggagatcgctcccgcattgctcgccacgaccgccgac
ctccaagcgctggtcgatgcgaaagatcgcacccaactcgatctgcccttgctcaagggc
tggcgccgggaactcttgggcgacacgttgttgcgtttgctcgaaggaaaattgtccgtc
cgtatcgatcccgcttccggaacgctcatctgcgccgaccgctcgacgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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