KEGG   Nelumbo nucifera (sacred lotus): 104610272
Entry
104610272         CDS       T04131                                 
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
  KO
K15255  ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nnu03032]
    104610272
   03029 Mitochondrial biogenesis [BR:nnu03029]
    104610272
Enzymes [BR:nnu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     104610272
DNA replication proteins [BR:nnu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    104610272
Mitochondrial biogenesis [BR:nnu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    104610272
SSDB
Motif
Pfam: PIF1 AAA_30 AAA_19 Pif1_2B_dom AAA_22 DEAD AAA_16 AAA_5 ATPase_2 Mg_chelatase Herpes_Helicase UvrD-helicase PhoH NACHT AAA_7 NTPase_1 SLFN-g3_helicase T2SSE ATPase ResIII NB-ARC RsgA_GTPase AAA_14 SH3_13 nSTAND3 ABC_tran AAA_11 MobB ATP-synt_ab Sigma54_activat TsaE Senescence_reg cobW RskA
Other DBs
NCBI-GeneID: 104610272
NCBI-ProteinID: XP_010275115
UniProt: A0A1U8B2Z3
Position
Un
AA seq 532 aa
MVSCMYTQKFVHSVVRSFYRASPALITTPTSHSYSSGIAWRLYYHTTTTNFAQLNAIPTN
AAPKRRSTTTTTTRRRRKRAEEAKRRAAAAAAVAAAPVEVPWTNQQLQVLKAVAEGKSVF
ITGSAGTGKTILLKRVVEVLKQLHTRKSVFVTASTGVAACALSGQTLHSFAGIGFGDGDR
ESLLLTAKSKSSYRWKRARALVIDEISMVDADLFDTLEYIAREIRRKESGRPWSGLQLIV
SGDFFQLPPIGNRLSLSGKEFAFEADCWDRSFDLQIELTQVFRQSDLKLVELLQGIRRGD
NDPERLKLLQDRTVTSEPDFSVTRLFPRKNDVSRVNKERLRSLGRETVTYTALDVGQEPW
KSQLKLGITPDEVELCVGARVMLLKNIAQWDGLVNGATGTITGFKQRETVAIDICCSQLL
PSVQFDSGPEIVILPEKWNVMEGDTVLATRKQIPLMLAWALSIHKCQGMTLNCLNTDLSR
AFGCGMVYVALSRVRSLEGLYLSGFNPSKIKAHPKVLEFYQRLYYSQNLSSF
NT seq 1599 nt   +upstreamnt  +downstreamnt
atggtttcttgcatgtatacgcagaagttcgtccactccgtcgtccgttccttctacagg
gcgtccccagcgctcattacaacacccacatctcacagctacagcagcggcattgcatgg
agactatactatcacaccaccaccaccaacttcgcccaacttaacgccattccaaccaac
gctgctccaaagcgccgctccaccactaccactaccaccagaagaagaagaaaacgcgcc
gaggaggccaagagaagagcagctgcggcggcggcagtagcagcagcacctgtagaagtg
ccctggaccaatcagcaattacaagtactcaaagcggtcgcagagggaaagtccgtcttc
atcactggctccgccgggacagggaaaaccatcttgctcaagcgcgtcgtcgaggttctc
aagcaacttcatacccgtaagagcgtcttcgtcaccgcttctactggtgtcgctgcttgt
gctctcagtggccaaacccttcattccttcgccggcattggattcggggacggtgatcgg
gagagcctgctcttaactgctaagtccaagtcttcctatagatggaagagggctagggcg
ttggtcattgatgaaattagcatggtagatgctgacttgtttgataccctagagtacata
gctcgagagattcgacgcaaggagagtggtcggccctggagtgggttacagcttatcgtt
agcggtgacttcttccagcttcctcctataggtaatcgtttatctttgtcagggaaggaa
tttgcgtttgaggctgattgctgggatagaagcttcgacctgcaaattgaacttactcaa
gttttcaggcagtccgacttgaaactggttgaattgcttcaagggataaggagaggggac
aacgatcctgaaaggttgaagcttctgcaggataggacggtgacaagcgagcctgatttc
tcggttactcgcctctttccaaggaagaatgatgtgagcagagtgaataaagagaggctg
agaagcttgggccgggagactgtcacctatacagcgcttgatgttgggcaggagccttgg
aagagccaactcaaattggggattactcctgatgaagtggagctctgtgtgggtgcaagg
gttatgttgctcaagaacattgctcagtgggatgggctagttaatggtgccactggtaca
attactggttttaagcagagggagacggtagccattgatatatgttgcagccagctgtta
cctagtgttcaatttgattcaggaccagagattgttatattgccagagaaatggaatgta
atggaaggtgatactgtgttagccacacgcaagcagattccgctcatgcttgcttgggcc
ctcagcattcacaagtgccagggaatgactctaaactgccttaataccgatctgtccaga
gcttttggttgtgggatggtctatgtagcactttcccgagtcaggagcttggagggcctt
tacttatccggtttcaatccttcaaagattaaggcacacccaaaggttttggagttctat
caaaggctttactatagtcaaaacttatcatcattttag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (34)   
   Pfam (34)   
All databases (68)   

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