KEGG   Actinomadura parvosata subsp. kistnae: BKM31_52205
Entry
BKM31_52205       CDS       T04759                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
noa  Actinomadura parvosata subsp. kistnae
Pathway
noa03420  Nucleotide excision repair
noa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:noa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BKM31_52205
   03430 Mismatch repair
    BKM31_52205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:noa03400]
    BKM31_52205
Enzymes [BR:noa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BKM31_52205
DNA repair and recombination proteins [BR:noa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BKM31_52205
   MMR (mismatch excision repair)
    Other MMR factors
     BKM31_52205
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 HRDC UvrD_C_2 AAA_30 C1_1 DUF3624
Other DBs
NCBI-ProteinID: AQZ68908
UniProt: A0A1V0AFC0
Position
11561432..11563480
AA seq 682 aa
MNDADDVLTGLDPEQRAVAEAVRGPVCVLAGAGTGKTRAITHRIAYAVRSGVVDAQSVLA
VTFTTRAAGELRQRLRALGAPGVQARTFHAAALRQLTFFWPRVIGGAAPSVIESKLPVLG
EACRSLRLTPERSELRDIASEVEWAKVTQIGPEDYVAAATKYHRTPPIPAEQVSRVYEAY
ERIRRERHLVDFETILELTAAVMTEHQEVAAQIRQQYRYFVVDEYQDVNPLQKLLLDTWL
GGRDDICVVGDPNQTIYSFTGASPRYLTGFGVEHPDAAVIKLVRDYRSTPQVVNLANLVI
AKGRSPHRLELVAQRPDGPKPAFTEYDDEPAEAAGVARGIRKLLDKGVPAREIAVLFRVN
SQSEAYEEALTKAEIPYVLRGAERFFERPEVRQAVVLLRGAARSAAGEPLASEVHHILSG
IGLTPAPPGGGKAREKWESLKALADLAEDMAAEGADLPAFVAELERRASEQHAPPVEGVT
LASLHAAKGLEWDAVFLVGVTDGMLPIIYAETPDQIEEERRLLYVGVTRAREHLSISWAL
ARAPGGRKSRRPSRFLDGLTGRASAPPRMAPSASRERRQVATPVSCRVCAKTLVNATEQK
LGRCSTCPADYDEALLERLKAWRTATAKETKVPPYVIFTDVTLQAIAERAPVTEQELLSI
AGVGRVKLDRYGEAVLELCRGS
NT seq 2049 nt   +upstreamnt  +downstreamnt
gtgaacgacgcggacgacgtactgaccgggctcgaccccgagcagcgtgctgtcgccgag
gccgtgcgcgggccggtgtgcgtgctggccggcgcgggcaccggcaagaccagggccatc
acccaccgcatcgcgtacgcggtgcgcagcggggtggtcgacgcgcagagcgtcctcgct
gtgacgttcaccacgcgcgcggcgggggagctgcgccagcggctgcgcgcgctcggcgcg
cccggcgtgcaggcccgcacgttccacgccgccgcgctgcgccagctcaccttcttctgg
ccgcgcgtgatcggcggcgcggccccgtcggtcatcgagtcgaagctgcccgtgctcggc
gaggcgtgccgcagcctgcgcctcacccccgaacgctccgagctgcgcgacatcgcctcc
gaggtcgaatgggccaaggtcacccagatcggcccggaagactacgtggccgccgccacg
aagtaccaccgcacgccgcccatcccggccgagcaggtcagccgcgtctacgaggcgtac
gagcggatcaggcgcgagcgccacctggtcgacttcgagaccatcctcgagctcaccgcg
gccgtcatgaccgagcaccaggaggtcgcggcgcagatccgccagcagtaccgctacttc
gtcgtcgacgagtaccaggacgtcaacccgctgcagaagctgctgctcgacacctggctc
ggcggccgcgacgacatctgcgtggtcggcgaccccaaccagaccatctactccttcacc
ggcgccagcccccgctacctgaccgggttcggggtcgagcatcccgacgcggccgtcatc
aagctggtgcgcgactaccgctccaccccccaggtggtgaacctggccaacctcgtgatc
gccaagggccgctcgccgcaccgcctggagctggtcgcccagcggcccgacggccccaag
ccggccttcaccgagtacgacgacgagcccgccgaggccgccggcgtcgcccggggcatc
aggaagctgctcgacaagggggtcccggcacgtgagatcgccgtgctgttccgggtcaac
tcccagtcggaggcgtacgaagaggccctgaccaaggcggagatcccgtacgtgctgcgt
ggcgccgagcggttcttcgagcggccggaggtccggcaggcggtcgtgctgctgcgcggc
gcggcccgctccgccgccggcgagcccctcgcctccgaggtccaccacatcctgagcggc
atcggcctgaccccggcgccgcccggcggcggcaaggcgcgggagaagtgggagtcgctc
aaggccctggcggacctggccgaggacatggcggccgagggcgccgacctgcccgcgttc
gtcgccgagctggagcggcgcgcctccgagcagcacgcgccgcccgtcgagggcgtcacc
ctggcctcgctgcacgccgccaagggtctggagtgggacgccgtgttcctcgtcggggtc
accgacggcatgctgccgatcatctacgccgagacgcccgaccagatcgaggaggagcgc
cggctcctgtacgtcggcgtcacccgggccagggagcacctgtcgatctcgtgggcgctg
gcccgcgcgccggggggccgcaagagccgccgcccgtcccgcttcctcgacggcctcacc
ggccgcgcctcggccccgccgcgcatggcgccgtccgcctcgcgcgagcgccgccaggtg
gccacgccggtgagctgccgcgtgtgcgccaagacgctggtcaacgccaccgagcagaag
ctgggccggtgctccacctgccccgccgactacgacgaggcgctgctcgaacgcctcaag
gcgtggcgcacggccacggccaaagagacgaaggtgccgccgtacgtcatcttcaccgac
gtgacgctgcaggccatcgccgagcgcgcgccggtcaccgagcaggagctgctgtcgatc
gcgggggtcggccgggtcaagctcgaccggtacggcgaggccgtcctggagttgtgccga
gggtcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system