KEGG T00281: Noc

Nitrosococcus oceani: Noc_0111

Entry

Noc_0111 CDS T00281

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

noc Nitrosococcus oceani

Pathway

noc00020	Citrate cycle (TCA cycle)
noc00310	Lysine degradation
noc00380	Tryptophan metabolism
noc01100	Metabolic pathways
noc01110	Biosynthesis of secondary metabolites
noc01120	Microbial metabolism in diverse environments

Module

noc_M00009	Citrate cycle (TCA cycle, Krebs cycle)
noc_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:noc00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:noc00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:noc00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

113444..116266

AA seq 940 aa
MDATVKKQASPSPLNAANASYLEALYEKFLKDPNTVPAHWRIWFKRLQAGVPEQAAPEFP
ARSPGPAVQPSAPSAVMTEGLTAEAAEKQIAVLQLINAYRFRGHQKANIDPLRIYDRPVV
SDLDPVFHGLTEEDMGKVFSTGSLIGIDQAPLEEIFALIKKIYCHTIGAEYMHITETAEK
RWIQSYLEGAQDDPGPSVELQRHILERLTAAEGLERYLHTNYVGQKRFSLEGGDSLIPLL
DNLILYAGSKGVGEIVIGMAHRGRLNVLVNTLGKLPRDLFMEFEGQHETDNKRSGDVKYH
LGFSADGDTPGGPVHITLAFNPSHLEIIDPVVEGSVRARQQRRKDWLGDEVIPVLIHGDS
AFAGQGVVMETFNMSQSRGFFTGGTLHIVINNQIGFTTSNPLDTRSTVYCTDVAKMVQAP
IFHVNGDDPEAVIFVTRLALDYRMTFKKDVVIDLVCYRRQGHNEADEPAVTQPLMYQKIR
SHPTVRHLYAERLAAQNIIASEEADRMMNNYRQTLEQGTNVAPYAEEGARSSRVNWKPFL
GTQWDQPVETEVPLPRLQELAAHIQQLPKGFELHSRVGHILADRRKMAAGALPIDWGFAE
TLAYATLLNEGFSVRLTGQDSGRGTFFHRHAVLYNQKDGQVYVPLEQVNPVQTDFSIIDS
LLSEEAVLAFEYGYAATEPNTLVIWEAQFGDFVNGAQVVIDQFLASGEAKWSRLCGLVLF
LPHGYEGQGPEHSSARLERFLQLCAEDNIQVCVPTTPGQMFHMLRRQMLRPYRKPLVVMT
PKSLLRHRLSVSSLDEFCSGAFRLVIGEVDDIKPAMVNRVILCAGKVYYDLLQARREQKR
QDVAILRLEQLYPFPQQQLERELERYRKAREIVWCQEEPQNQGAWDQLHRPLQGCLSRNQ
SLHYTGRASSAAPAVGYFNLHLEQQRAVVEEAFGSMKESQ

NT seq 2823 nt +upstreamnt +downstreamnt
atggatgctactgtcaaaaaacaagcaagcccttccccattaaatgctgccaatgcctct
tatttggaggcgctgtacgaaaaatttttaaaagatcctaataccgtacccgcccattgg
cgaatttggttcaagcgtctccaggcaggtgttccggagcaggccgctcctgaatttcct
gcccgctctccagggccagcggtgcagccatcagcaccgtcagcagtgatgaccgagggg
ttaacggcggaggcggctgaaaaacaaatcgcagtgcttcaactcatcaatgcctaccgt
ttccggggccatcaaaaggccaatatcgaccccttgcgcatttatgatcgtccggtggtt
tccgatcttgatcctgtcttccatggtttgacggaagaagatatgggcaaagtcttcagt
acaggatcgctgattgggatcgatcaggctcctctggaagaaattttcgccttaataaag
aagatctattgccataccattggcgctgagtatatgcacatcactgagaccgccgagaaa
cgctggattcaaagttatctggagggagcccaggacgatccgggcccgtctgtagaatta
cagcgccatattctggagcggcttacagcggctgaggggctggagcgctatttacacacc
aattacgtgggtcagaaacgtttttccctggaggggggagatagtttgataccccttctg
gataatttgatcctttatgcaggtagtaagggggtgggggaaatcgtcattggcatggct
caccggggacggttgaatgtgctggtgaatactttgggtaaactaccccgtgatttattc
atggagtttgagggccaacatgaaacggacaacaaacgctcgggagacgtcaagtatcat
ttaggattctcggcggacggggataccccaggtgggccggtacatattaccctggcgttt
aacccctcccatttagaaattattgacccggtagtggaaggttcggtgcgggcccgccag
caacggcgcaaggattggttaggcgatgaggtgataccggtgcttattcacggagattcc
gcctttgccggtcaaggtgtggtcatggaaacctttaacatgtcccaatcccggggattt
ttcaccggtggcaccctccatatcgtgatcaacaaccagattggttttaccaccagcaac
cccctggatacccgttccacagtttactgcacggatgtggctaagatggtacaagcccca
atttttcatgtgaatggggatgatcccgaagcggttatctttgttacccgcttagcgctt
gattaccgcatgacctttaaaaaagatgtggtgatcgatctggtgtgctatcggcgtcaa
gggcataacgaagcggatgagccggcggtcacccagccgcttatgtaccagaaaatccgc
tcccatcctacggttcgccatctttatgctgagcgattggcagcgcaaaatatcattgca
tccgaggaggcggatcgcatgatgaacaattatcggcaaaccctagagcaagggaccaat
gtggcgccttatgcggaagaaggcgcccgttcttcaagggtgaactggaagccttttttg
ggaacccaatgggatcagccggtagaaaccgaagtgcctttgccgcggctccaagagctt
gcggcccatatccaacagcttcccaaagggtttgagcttcactcccgggtaggtcatatt
ttggccgatcgccgtaaaatggctgcgggggccttgcctatcgattggggatttgcggag
actctggcctacgctactttgttaaatgaggggttctcggtccggctcacgggtcaagac
agtggccgcggcacttttttccatcgccatgccgtgctttataatcagaaagacggccag
gtctatgtccccttggagcaggtaaaccccgtgcaaacggattttagtattattgactcc
ctcctctcggaagaagcggtattggcctttgaatatgggtacgccgccacggagcccaat
accttagtgatctgggaggcgcagtttggggattttgtcaatggtgctcaagttgtcatt
gaccagtttcttgcttccggggaagcaaaatggtcccgcttgtgcgggttggtactgttt
cttccccatggctatgaaggccaggggccggaacattcttcggcccggttagagcgtttt
ctacagctttgtgcggaagataatatccaggtctgcgtaccgaccacaccggggcaaatg
tttcatatgctacggcggcaaatgctgcggccttaccgcaaacctctcgttgtgatgacg
ccaaagagtttattgcgccaccggctttcggtctcatccttggatgagttctgcagcggc
gcttttcggttagtgatcggtgaagtagatgatattaagcctgccatggtgaatcgcgtt
attctgtgtgctggcaaagtatactatgatttgctgcaagctcggcgggagcagaaacgg
caagatgtggccattctccgtttggaacagctctatccgtttccccagcagcaattagag
agagagcttgaacgttaccgcaaggccagggagattgtctggtgtcaagaagaacctcaa
aaccaaggagcatgggatcaacttcatcgtcctttgcaaggatgtttgagtcgaaaccag
tccttgcattacacaggccgggcctcgtcggcggcacccgcggtgggttactttaacttg
catcttgaacagcagcgtgcggtggtagaagaggcttttggttcgatgaaagagagccag
taa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-NOC (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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