KEGG   Nitrosococcus oceani: Noc_1659
Entry
Noc_1659          CDS       T00281                                 
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
noc  Nitrosococcus oceani
Pathway
noc03030  DNA replication
noc03430  Mismatch repair
noc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:noc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Noc_1659
   03430 Mismatch repair
    Noc_1659
   03440 Homologous recombination
    Noc_1659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:noc03032]
    Noc_1659
   03400 DNA repair and recombination proteins [BR:noc03400]
    Noc_1659
Enzymes [BR:noc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Noc_1659
DNA replication proteins [BR:noc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Noc_1659
DNA repair and recombination proteins [BR:noc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Noc_1659
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C AAA HolB_lid Mg_chelatase AAA_16
Other DBs
NCBI-ProteinID: ABA58131
UniProt: Q3JAL5
Position
complement(1853043..1854056)
AA seq 337 aa
MPEFYPWHQSHWNSLMASQIAKRMPHAILLMGPEGMGKRSFASNLIQALSCEYPQKGGHG
CGSCAGCRLQLAGSHPDNLTLFPREGKQTISVNQIRQLHSHLALKARQSLFKTVIIYPAE
EMTLSAANSLLKILEEPPGRTVLLLITSASLRLPITIRSRCQQLFFTISKSQEVKMWLQQ
RLPPSMNLDAVTLLRLSGGGPLRALEYVEQNFLFYRKEFINNLFSLTQGKLDLFEMVRSC
LKDNLGEPLYWISTLVEDTIRLRSGVSKRFLVNHDVANSLQLLARRASFEMLFALLKKAS
CNREIWKGQININPQLLLEEILIQWLICFSKVNHEHT
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgcctgaattttacccttggcatcaatcgcattggaatagtcttatggcatcccaaatt
gcaaaacgtatgccccacgccatattgttaatgggtccagagggtatgggaaaacgctct
tttgcatctaacttgattcaggctctatcctgtgaatatccgcaaaaaggaggccacggt
tgtggttcttgtgctggatgtcgcttgcagcttgccggcagtcatcctgacaatttgact
ctctttcccagagaaggaaagcaaacgatctcagtcaatcagatccggcaactccattcc
cacctagcacttaaggcacggcaatcattatttaagacagttattatttatcctgccgaa
gaaatgaccttgagtgctgctaatagtttacttaagattttagaagaacctcctggtaga
accgttttgcttcttattacctctgcgtccttacgcttaccgatcactattcgtagtcgt
tgtcaacagttattttttacgatttctaaatcgcaagaggtgaaaatgtggctacagcaa
cgtctccctccttctatgaatctggatgcggtaactttgctaaggttatccggagggggg
cctttgcgggctttagagtatgtagaacagaatttcttattctaccgtaaggagttcatc
aataatcttttttctttgactcaaggtaaattggatctttttgagatggtaagaagttgc
cttaaggataacctgggagagccgctatattggatatctacgttagtagaagatacaatt
cgtctcagaagcggagtctccaagagatttttggtaaatcacgatgttgctaattcgctt
caactgcttgcgcgaagggcatcttttgaaatgctctttgctttgttaaagaaggctagt
tgcaatcgggaaatatggaaagggcaaattaatattaatcctcagctcttactagaagaa
atactcattcagtggttaatatgttttagcaaggttaatcatgagcatacctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

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