KEGG   Nitrosococcus oceani: Noc_2648Help
Entry
Noc_2648          CDS       T00281                                 

Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
noc  Nitrosococcus oceani
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:noc00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Noc_2648
Enzymes [BR:noc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Noc_2648
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Noc_2648
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
3001673..3002488
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETVRRGIEPHLVGRQIHTVIVRESRLRWPIPLSLTQNLIGQSFLAVGRRGKYL
LLSCTQGTIILHLGMSGSLRLVTTNTPHGKHDHLDIVLNNGRCLRFNDPRRFGSVSWTQA
NPLHHPLLEILGPEPLESLFDGHYLFKHSRHRRTSVKAFIMNHRIVAGVGNIYANEALFL
AGIHPRRSASRIGLARYQRLAETTKTVLYNAIQAGGTTLRNFLTSDGKPGYFANQLQIYG
RSAHPCPICGTPIRLERIGQRASYYCTQCQH
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgaactgccagaggtcgaaaccgttcgtcgtggcatcgagccgcacctagtaggc
cgccaaatacatacggttattgtccgagaatcgcgtctacgctggccaattccgctctcc
ttaacccagaatcttattggccagtcctttcttgctgtaggacgccgtggcaaatacctc
cttttaagttgtactcagggtacgattattcttcacctcggtatgtctggcagtctacgt
ctggtcactactaatacaccacatggaaagcatgatcatcttgatatcgtattgaataat
ggccgctgtttgcgtttcaatgatccccgccgatttggatcagtatcctggactcaggca
aaccccctgcatcaccccctgctggagatacttggtccagaacccttagaatccctgttt
gatggacattatctttttaaacactcccgtcataggcgaacctcggttaaagcctttatc
atgaaccaccgaatagtcgccggagttggaaatatttatgccaacgaggcgctgtttctg
gcaggaattcaccctcggcgatctgctagccgcatcggtttagcccgttaccaacggcta
gcagaaaccactaaaacagtgctatacaacgcaattcaggcggggggaaccacattgcgg
aattttttaactagcgatggcaaacccggctatttcgctaaccagctccaaatctatggc
cgtagcgctcatccttgtccgatttgtggaactcctattcgcctcgaacgcatcggccaa
cgggcaagctattactgcacccaatgccagcattga

DBGET integrated database retrieval system