KEGG   Nostoc sp. CENA543: CLI64_11665
Entry
CLI64_11665       CDS       T05285                                 
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
noe  Nostoc sp. CENA543
Pathway
noe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:noe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CLI64_11665 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:noe03019]
    CLI64_11665 (recQ)
   03400 DNA repair and recombination proteins [BR:noe03400]
    CLI64_11665 (recQ)
Enzymes [BR:noe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CLI64_11665 (recQ)
Messenger RNA biogenesis [BR:noe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CLI64_11665 (recQ)
DNA repair and recombination proteins [BR:noe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CLI64_11665 (recQ)
SSDB
Motif
Pfam: RQC HTH_40 DEAD Helicase_C HRDC RecQ_Zn_bind ResIII GerE HTH_24 HTH_38 HTH_11 HTH_28 MarR HTH_7 HTH_29 HTH_5 HTH_IclR Sigma70_r4_2 MarR_2
Other DBs
NCBI-ProteinID: AUT01003
UniProt: A0A2I8A6M1
Position
2830409..2832562
AA seq 717 aa
MLQYPNLEQALKYHFGYDNFRPGQRQIIQDALQNRDLLIVMPTGGGKSLCFQLPALMKTG
LTVVVSPLIALMQDQVEALRNNNISATFLNSSLNPYQVRSREEAIVNGKVKLLYVAPEKL
LSERFLPFLDLVHEKIGISIFAIDEAHCVSEWGHDFRPEYRQLKLLRKRYANVPMLALTA
TATDRVRSDIIQQLGLKQPSIHLASFNRQNLYYEVRAKSKQAYAELLELIRDTEGSVIVY
CLTRKKVEELTFKLQNDKVSVLPYHAGLPDDERSKNQTRFIRDDVRVMVATIAFGMGINK
PDVRLVVHFDIPRNLESYYQESGRAGRDGEPSRCTIFFSFADIKTIEWSIEQKTEPQEQL
IARQQLRQMIDYAEGTDCRRTIQLGYFGERFAGNCANCDNCRHPKPLEDWTIEAMKFLSC
VARCKERFGMLHIIDVLRGAKKEKIMQYEHDKLSTYGIGKDRTADEWRILGRSLLHQGLL
EQTTDGYSVLKLNALSWEVMRRQRQVLLSVPVAQKVRLVPDNPKAEIAEALLQRLRSLRK
QLADEQSVPPYVVFHDSTLKLMAQVQPKNLAEFGKLSGVGSHKLAQYGEKFLSEIRAYIQ
EENSTTKSLEYTPSLSLVSGTELQTLQLHQQGLNIAQIAQKRNLSPATIASHLEKLIEKN
QPVDLNQLVPLEHQQKIWQVLEVLGDIPLTPIKEQLGNSYTFDEIRLVREKWRRQRK
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgcttcagtatcccaatctcgaacaagcgttaaaatatcacttcggttatgataacttt
cgtccaggacaacggcaaattatccaagacgcgctgcaaaatcgggatttattgatagtg
atgcctacgggtgggggaaaatctttgtgctttcagttacctgcactgatgaaaacagga
ctgactgtcgtggtatcaccgttaattgccctgatgcaagaccaagtagaagcactgcga
aataataatatctcagctaccttcctcaatagtagtttgaatccctaccaagtgcgatcg
cgggaagaagccattgtcaatggtaaggtaaaattgctctacgtcgccccagaaaagctg
ctgagtgaaagatttctcccttttctggatttagttcatgaaaaaattgggatatcgata
tttgcaattgatgaagcgcactgtgtttcggaatggggacatgattttcggccagaatat
cgtcagttaaagttactgcgaaagcgttacgccaatgttcccatgctggcgttgacagca
accgccacagaccgcgtccggtctgatatcattcaacaattaggcttaaaacagccgagt
attcatcttgctagttttaatcggcaaaatttatattacgaagtccgcgccaaaagtaag
caagcttacgccgaattattagaattaattcgggatacggaaggctcagttattgtttat
tgtttaacgcgtaaaaaggttgaagaactaacttttaaactgcaaaatgataaggtttcc
gtcttaccttatcacgccggtttacctgatgatgaacggagtaaaaatcaaacgcgattt
attcgggatgatgtgcgggtgatggtggcaactatcgcctttgggatgggaattaataaa
cctgatgtgcggttagtggttcattttgatattccccgaaatttagagagttactatcaa
gaatcaggtagggcgggaagagacggcgaaccatcacgatgtacaatcttttttagtttt
gctgatattaaaaccattgaatggagtattgaacaaaaaaccgaaccccaggaacaattg
attgccaggcaacaactccggcaaatgatagactatgctgaagggacagattgtcggcgg
acaattcaactaggttattttggcgaacgctttgcaggtaattgtgctaactgtgataat
tgtcgccatcccaaacctttagaagattggacaattgaagccatgaagtttttatcttgt
gtggcgcgatgtaaagaaagatttgggatgttacacattattgatgtgttgcgtggggcg
aaaaaagagaagattatgcaatatgaacatgataaactttctacctacggtataggtaaa
gatagaaccgcagatgaatggcgaattttgggaagatcgcttttacatcaaggtttatta
gaacaaactaccgatggttattctgtactgaaattaaatgcgttaagttgggaagtaatg
cgccgtcaacgccaagttttattatctgttcctgtggcgcaaaaagtgcggttagtcccc
gataatcccaaagctgagattgcagaagcattattacagagattacgatcgctgcgtaaa
caactagccgatgaacagtctgtacctccttatgtagtctttcacgattctactttgaaa
ttaatggcacaggtacagccgaaaaatttagccgaattcggtaaactttctggtgtaggt
agtcataaactcgcccaatatggggaaaaatttctctcagaaattcgcgcctatattcaa
gaagaaaattcgacaactaaatcacttgaatatacaccctcactcagcttagtttctggg
actgaattacagacattacagttacaccagcaaggcttaaatattgctcaaatcgcccaa
aaacgcaatttaagcccagctactattgctagtcatttagaaaaactcatcgaaaaaaat
cagcctgtagacttaaatcaattagtccctttggaacatcagcaaaagatttggcaagtt
ttagaagttctgggtgatattcccttaaccccaattaaagaacagttaggcaatagttat
acctttgatgagattcgcctagtgcgggaaaaatggcgacgacaacgcaagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (30)   

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