KEGG   Neofusicoccum parvum: UCRNP2_4795
Entry
UCRNP2_4795       CDS       T03126                                 
Name
(GenBank) putative transcription rna-processing factor ssu72 protein
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
npa  Neofusicoccum parvum
Pathway
npa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:npa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    UCRNP2_4795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:npa03021]
    UCRNP2_4795
   03019 Messenger RNA biogenesis [BR:npa03019]
    UCRNP2_4795
Enzymes [BR:npa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     UCRNP2_4795
Transcription machinery [BR:npa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     UCRNP2_4795
Messenger RNA biogenesis [BR:npa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     UCRNP2_4795
SSDB
Motif
Pfam: Ssu72 Thioredoxin_6 Dscam_C
Other DBs
NCBI-ProteinID: EOD48481
UniProt: R1GJM5
Position
Unknown
AA seq 284 aa
MSADPRLRGKAAPVPPPPPPPDESPDSSTAALDGSVASAAPSAPTADSDGGFKLKFCTVC
ASNNNRSMEAHLQLSNAQFPVISFGTGSLVRLPGPSISQPNVYGFNSVTYDSMYRELESK
DARLYRANGILNMLDRNRNTKRYPERWQDWRVGVPRINHKEDRGAEGVEGGVVDVVITCE
ERCWDAVVDDLLNRGSPLNRPVHVFNVDIKDNHEEALVGGRAILDLANRLNEAAKEEKAL
KGPQGWDRGQGSARIGFDERVPDILGSWQEKWPNLPALWTLAWF
NT seq 855 nt   +upstreamnt  +downstreamnt
atgtctgcagatccccggctgcgcggcaaggctgcccccgttccgccgccgccgccgccg
cctgacgagtcgcccgactcgtccaccgctgcgctcgatggcagcgtcgcgtccgctgca
ccgtccgctcccacagctgattcagacggtggctttaagctcaagttctgcaccgtgtgc
gccagcaacaacaacagatccatggaagcccatctgcagctctccaatgcccagtttccc
gtcatctcctttggcactggctctctcgtccgcctcccgggcccgagcatatcccagccc
aatgtgtatggcttcaatagcgtcacctacgactctatgtatcgcgagctcgagtccaag
gatgcccgtctgtaccgcgccaacggaattctcaacatgttggatcgcaaccggaacact
aaacggtatcccgagcgctggcaagactggcgcgttggcgtgccgcgcatcaatcacaag
gaagacagaggcgcagagggcgtcgagggaggcgtggttgacgttgtcatcacttgcgag
gagcgatgctgggatgctgtcgtagacgacctgctcaacaggggcagcccacttaatcgg
ccagttcatgtcttcaacgtcgacatcaaagataaccacgaggaagccctggtcggcggc
agggccattctcgacctggcgaacagactcaatgaagccgcaaaagaagaaaaggcacta
aagggtccacagggttgggacaggggccagggtagcgctaggattggctttgacgagcgc
gtaccggatatcctgggaagctggcaagaaaagtggcctaatcttcccgcgctttggacg
ctggcatggttctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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