KEGG T01515: PP1Y

Novosphingobium sp. PP1Y: PP1Y_AT17276

Entry

PP1Y_AT17276 CDS T01515

Definition

2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

npp Novosphingobium sp. PP1Y

Pathway

npp00020	Citrate cycle (TCA cycle)
npp00310	Lysine degradation
npp00380	Tryptophan metabolism
npp01100	Metabolic pathways
npp01110	Biosynthesis of secondary metabolites
npp01120	Microbial metabolism in diverse environments

Module

npp_M00009	Citrate cycle (TCA cycle, Krebs cycle)
npp_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:npp00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:npp00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:npp00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

334141224

NCBI-GeneID:

10715046

UniProt:

F6IMG0

Position

complement(1822111..1824963)

AA seq 950 aa
MGNENLDFTPDLGMDEPQPGPSWQRSNWPRVGAEFEDDLTQGLDPTALKVQIEKAAAKGG
KKVDQASLDQAAADAIRAMMLIRTYRVRGHLAADLDPLGLNQRKLPQDLTPEYHGFTGDA
LDRPVFVGGNLGLEWTTVRELVQILRANYCGKVGLEYMHIADVEERRFLQERMEGADKEI
EFTPEGKKAILQAVVRGEQYEKFLGKKYVGTKRFGLDGGESMIPALESVIKYGGAQGVKE
IVYGMAHRGRLNVLANVMAKPYKVIFHEFSGGTANPEDVGGSGDVKYHLGTSTDREFDGI
KVHMSLMPNPSHLETVDPVVLGKVRAYQVFHDDIGDDVGPGAKHKQVLPVLIHGDAAFAG
QGVVWECFGLSGVAGYNTGGCIHFVINNQIGFTTTPNFARNSPYPTDVAKGVQAPILHVN
GDDPAAVTFACKLAIDYRQTFGRDIVIDMWCYRRFGHNEGDEPSFTQPLMYAQIKKHPSV
STIYAERLKAEGVIDDAFLAETVEGFNNHLEEEFEAAKTYKANHADWFGGRWSGFNKPVD
PETARRNVHTGIEGKLFDSLGRTLTTVPDDLTIHKTLARVIQAKDEMFKTGEGFDWATAE
ALAFGSLVSEGYGVRLSGQDCERGTFSQRHAVWVDQKTERKYTPLETLPHGTFEVLNSTL
SEYGVLGFEYGYASADPKTLVLWEAQFGDFANGAQIIIDQYIAASEAKWLRANGLVMLLP
HGYEGQGPEHSSARLERYLQLCASDNIQVCNITTPANYFHVLRRQMHRPFRKPLIIMTPK
SLLRHPMAKSPASEFVGEGHFFRILSDPKAPSDEKTKKVILCSGKVAYDLFEARDQNDID
DTQIIRIEQLYPFPGEPLALRLSRMKNLEEIVWCQEEPKNNGAWFFVESLIEESAKEAGV
SACRPRYAGRGASASPATGLAKRHAAEQAALVADALHLSVRDELRRKQKA

NT seq 2853 nt +upstreamnt +downstreamnt
atgggcaacgaaaatctcgatttcactccggacctcggcatggacgagccccagcccgga
ccgagctggcagcgcagcaactggccgcgcgtaggggccgagttcgaggacgacctcacc
cagggtctcgatcccacggccctcaaggtccagatcgaaaaggccgctgccaagggcggc
aagaaggtcgatcaggccagcctcgaccaggctgccgccgacgcgatccgcgccatgatg
ctgatccgcacctatcgcgtgcgcggtcacctggcggcggacctcgacccgctcggcctc
aaccagcgcaagctgccgcaggacctcacccccgaataccatggcttcaccggcgacgcg
ctcgaccggccggtgttcgtcggcggcaacctcggcctcgagtggaccacggtgcgcgaa
ctggtgcagatcctgcgcgccaactactgcggcaaggtcggcctcgaatacatgcacatc
gccgatgtcgaggaacgccgtttcctccaggagcggatggaaggcgccgacaaggaaatc
gagttcacccccgagggcaagaaggcgatccttcaggccgtcgtgcgcggcgagcagtac
gagaagtttctcggcaagaagtacgtcggcaccaagcgcttcggcctcgacggcggtgaa
tcgatgatcccggcgctggagtcggtgatcaagtacggcggcgcccagggcgtcaaggag
atcgtctacggcatggcccaccgcggccgcctcaacgttctcgccaacgtgatggccaag
ccctacaaggtcatcttccacgaattctccggcggcaccgccaaccccgaggacgtcggc
ggttcgggcgacgtgaagtaccacctgggcacttccaccgaccgcgagttcgacggcatc
aaggtccacatgagcctgatgcccaacccctcgcacctcgaaacggtcgatccggtcgtg
ctcggcaaggtccgcgcctaccaggttttccatgacgacatcggcgacgacgtgggtccc
ggcgccaagcacaagcaggtcctgccggtgctgatccacggcgacgcagccttcgccggc
cagggcgtggtgtgggaatgcttcggcctttcgggcgttgccggctacaacaccggcggc
tgcatccacttcgtcatcaacaaccagatcggcttcaccacgacgccgaacttcgcgcgc
aactcgccctacccgaccgacgtcgccaagggtgtccaggcgccgatcctgcacgtcaac
ggcgacgatccggccgcggttaccttcgcctgcaagctggcgatcgactatcgccagacc
ttcggccgcgacatcgtgatcgacatgtggtgctaccgccgcttcggccataacgaaggc
gacgagcccagcttcacgcagccgctgatgtatgcgcagatcaagaagcacccctcggtc
agcacgatctacgccgagcgcctgaaggccgaaggcgtgatcgacgacgccttccttgcc
gagacggtggaaggcttcaacaaccacctcgaagaggaattcgaggcggccaagacctac
aaggccaaccatgccgactggttcggcgggcgctggagcggcttcaacaagccggtcgat
ccggaaaccgcgcgccgcaacgtgcataccggcatcgagggcaagctgttcgacagcctc
ggccgtaccctcaccacggtccccgacgacctgaccatccacaagaccctcgcccgcgtc
atccaggcgaaggacgagatgttcaagaccggcgagggcttcgactgggccaccgccgaa
gcgctcgctttcggcagcctcgtctccgaaggctacggcgtgcgcctgtccggccaggac
tgcgaacgcgggacgttctcgcagcgccacgccgtctgggtcgaccagaagaccgagcgc
aagtacacgccgctcgaaaccctgccccacggcaccttcgaggttctgaactcgacgctt
tcggaatacggcgtgctcggcttcgagtacggctatgccagcgccgatccgaagacactg
gtcctgtgggaagcgcagttcggcgacttcgccaacggcgcgcagatcatcatcgaccag
tacatcgccgcatcggaagccaagtggctgcgcgccaacggcctcgtgatgctgctgccg
cacggctacgaaggccagggtccggagcactcctccgcccgcctcgaacgctacctgcag
ctctgcgcctcggacaacatccaggtgtgcaacatcactaccccggccaactacttccac
gtgctgcgccggcagatgcaccgtccgttccgcaagccgctgatcatcatgacgcccaag
tcgctgctgcgccatccgatggcgaagtcgccggcttcggagttcgtgggcgaaggccac
ttcttccgcatcctgtcggacccgaaggcgccgagcgacgagaagaccaagaaggtcatc
ctgtgttcgggcaaggtcgcctacgacctgttcgaggcgcgcgaccagaacgacatcgac
gacacccagatcatccgcatcgagcagctctaccccttcccgggcgaaccgctggccctg
cgcctctcgcgcatgaagaacctcgaggagatcgtctggtgccaggaagagcctaagaac
aacggcgcctggttcttcgtcgaatcgctgatcgaggaatccgccaaggaagccggcgtc
tctgcgtgccgtccgcgctatgccggccgcggcgcctcggcctcgcccgcaaccggcctt
gccaagcgccatgccgccgaacaggccgcgctggtggccgatgcactccacctttccgtc
cgtgacgaactccgacgcaagcagaaggcttga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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