KEGG   Novosphingobium sp. PP1Y: PP1Y_AT18960
Entry
PP1Y_AT18960      CDS       T01515                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
npp  Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:npp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:npp03009]
    PP1Y_AT18960
Enzymes [BR:npp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     PP1Y_AT18960
Ribosome biogenesis [BR:npp03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PP1Y_AT18960
SSDB
Motif
Pfam: PseudoU_synth_2 S4 YuA_Gp49
Other DBs
NCBI-ProteinID: CCA92775
UniProt: F6IMX3
Position
complement(2006911..2008173)
AA seq 420 aa
MSRPENNDIVRQFTVGADDEGVRLDRWFKRHLPQVGFATVSRWARTGQIRVDGKRADVAD
RLSAGQVLRVPPGGEVKPGGKPARTRRELTEEELELADSMVLTQDRAAIVLNKPPGLATQ
GGSGMKQHVDGLLDAYAPDGPRPRLVHRLDKDTSGVLLIARTPGSAAFFSKRFSGRSARK
IYWALVVGVPSISDGMIELPLAKQPGTGGEKMHVDEEGGQPARTRYRVLDRAGNRAAWVE
LHPLTGRTHQLRVHMAAIGHPIVGDGKYGGQDAFLTGTISRKMHLHARRLIIDHPDGAPL
DVTAPLPEHFANSLEQLGFDEADGAELPEAPPEPGKDEQKRAAKAHSKQYRKERRGERRS
RGDGPPPRGGKPGARSGKPARPGGKPARPGGKPGPGKPAGGRPTGGRSGAKKPGGPRGKR
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgagccgccccgaaaataacgacattgtccgccagttcaccgtcggcgccgacgatgaa
ggcgtccgccttgaccgctggttcaagcggcacctgccgcaagtcggcttcgccaccgta
tcgcgctgggcccgcaccgggcagatccgcgtcgacggcaagcgcgccgacgtcgccgac
cggctgagcgccggacaggtcctgcgcgtccccccgggcggcgaggtcaagccgggcggc
aagccagcccgcacgcgccgcgagctgaccgaggaagaactggaactcgccgattcgatg
gtcctcacgcaggaccgcgccgccatcgtgctcaacaagccgccgggccttgccacgcag
ggcggctcgggcatgaagcagcacgtcgacggcctgctcgacgcctatgcgcctgacggc
ccgcgtccccgcctcgtccaccggctcgacaaggacacctccggcgtcctgctgatcgcc
cgcaccccgggcagcgccgcgttcttctccaagcgcttctccggccgttcggcgaggaaa
atctactgggctctcgtggtcggcgtgcccagcatctcggacggcatgatcgaactgccg
ctggccaagcagccgggcaccggcggcgagaagatgcacgtcgacgaggaaggcggccag
cccgcacgcacccgctaccgcgtgctcgaccgcgccgggaaccgcgccgcgtgggtggaa
ctgcatcctctgaccggccgcacccaccagctgcgcgtgcacatggcggcaatcgggcac
ccgatcgtcggcgacggcaagtacggcgggcaggacgccttcctgaccggcacgatcagc
cgcaagatgcacctgcacgcgcgccgcctgatcatcgaccatcccgacggcgccccgctc
gacgtgaccgccccgctgcccgagcatttcgccaattcgttggagcagctcggcttcgat
gaggccgacggcgccgaactgcccgaagctccgcccgagccgggcaaggacgagcagaag
cgcgcggccaaggcccactccaagcagtaccgcaaggaacggcgcggagagcggcgctca
cgcggggacggcccgccgccgcgcggcggcaaaccgggggcacgctcgggcaagcccgcc
cgccccggcggcaagcctgcgcggcccggcggaaagcccggccccggcaagcctgccggt
ggacggccgacgggaggccggagcggcgcgaagaagcccggcggcccgcgaggcaagcgg
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system