KEGG   Novosphingobium sp. PP1Y: PP1Y_AT24830
Entry
PP1Y_AT24830      CDS       T01515                                 
Name
(GenBank) glycine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp00260  Glycine, serine and threonine metabolism
npp00460  Cyanoamino acid metabolism
npp00630  Glyoxylate and dicarboxylate metabolism
npp00670  One carbon pool by folate
npp00680  Methane metabolism
npp01100  Metabolic pathways
npp01110  Biosynthesis of secondary metabolites
npp01120  Microbial metabolism in diverse environments
npp01200  Carbon metabolism
npp01230  Biosynthesis of amino acids
npp01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:npp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PP1Y_AT24830
  09102 Energy metabolism
   00680 Methane metabolism
    PP1Y_AT24830
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PP1Y_AT24830
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    PP1Y_AT24830
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    PP1Y_AT24830
Enzymes [BR:npp01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     PP1Y_AT24830
SSDB
Motif
Pfam: SHMT DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: CCA93278
UniProt: F6IPC6
Position
complement(2602543..2603841)
AA seq 432 aa
MTVETAIRSPGFFTDTIADSDPAVAKAIGKELKRERKQIELIASENIVSKAVLEAQGSVL
TNKYAEGYPGKRYYQGCEPSDEVETLAIERAKQLFDCGFANVQPHSGAQANGAVLLATVK
PGDTVMGMSLDAGGHLTHGARAALSGKWFNAVQYGVTKDTHLIDYDQVEALAKEHRPKLI
IAGGSAYPRVIDFKRMREIADSVGALFQVDMAHFAGLVAAGVHPSPFPHAHIATTTTHKT
LRGPRGGMILTNDEALAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPDFKDYSKKVV
ENAKALAETLKARGAEIVSGGTDTHLALIDLSPLGVTGKDADEALERAGITCNKNGIPFD
PLPPMKTSGIRVGSPAGTTRGFGVEEFREIGNMVADVLDGLAKCGEEGDAQVEQNVRARV
EALCDRFPIYED
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgaccgtcgaaactgccatccgttcccccggcttcttcaccgacacgatcgcggacagc
gatcctgccgtcgccaaggccatcggcaaggaactcaagcgcgagcgcaagcagatcgag
ctgatcgcctcggagaacatcgtctccaaggccgtgcttgaagcgcagggctcggtcctc
accaacaagtacgccgaaggctacccgggcaagcgctactaccagggctgcgagccttcc
gacgaagtcgagacgctggccatcgaacgcgccaagcagcttttcgactgcggcttcgcg
aacgtccagccccactcgggcgcacaggccaacggtgcagtcctgctcgcgacggtcaag
ccgggcgatacggtcatgggcatgagcctcgatgccggcggccacctcacccacggcgcg
cgcgccgcgctttcgggcaagtggttcaacgcggtgcagtacggcgtgaccaaggacacc
cacctgatcgactacgaccaggtcgaggctctcgccaaggaacaccggcccaagctgatc
atcgccggcggctcggcctatccgcgtgtgatcgatttcaagcgcatgcgcgagatcgcc
gacagcgtgggcgcgctgttccaggtcgacatggcgcacttcgcgggcctcgtggccgcg
ggcgtgcacccctcgccgttcccgcacgcgcacatcgccaccaccaccacgcacaagacc
ctgcgcggtccgcgcggcggcatgatcctcaccaatgacgaggcgctggccaagaagatc
aactcggccgtgttccccggcctgcagggcggtccgctgatgcatgtcatcgccgccaag
gccgtggctttcggtgaagcgctgcgtcccgatttcaaggactacagcaagaaggtcgtc
gagaacgccaaggcccttgccgaaacgctcaaggcacgcggcgccgagatcgtctcgggc
ggcaccgacacgcaccttgcgctgatcgacctctcgccgctcggcgtgaccggcaaggac
gccgacgaagcgctcgagcgtgccggcatcacctgcaacaagaacggcattccgttcgac
ccgctgccgccgatgaagaccagcggcatccgcgtcggttcgcctgcgggcaccacccgc
ggcttcggggtcgaggaattccgcgagatcggcaacatggtcgccgacgtgctcgacggt
ctggccaagtgcggcgaagaaggtgatgcgcaagtggaacagaacgtgcgcgcacgcgta
gaagccttgtgtgaccgcttcccgatctacgaggactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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