KEGG   Novosphingobium sp. PP1Y: PP1Y_AT30672
Entry
PP1Y_AT30672      CDS       T01515                                 
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp00020  Citrate cycle (TCA cycle)
npp00190  Oxidative phosphorylation
npp00650  Butanoate metabolism
npp01100  Metabolic pathways
npp01110  Biosynthesis of secondary metabolites
npp01120  Microbial metabolism in diverse environments
npp01200  Carbon metabolism
Module
npp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
npp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
npp_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:npp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    PP1Y_AT30672
   00650 Butanoate metabolism
    PP1Y_AT30672
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    PP1Y_AT30672
Enzymes [BR:npp01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     PP1Y_AT30672
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C GIDA DAO Pyr_redox_2 Thi4
Other DBs
NCBI-ProteinID: CCA93825
UniProt: F6IGY1
Position
complement(3226093..3227901)
AA seq 602 aa
MSAPAYKIIDHIYDTVVVGAGGSGLRATMGSAEAGLKTACITKVFPTRSHTVAAQGGIAA
SLQNNTPDHWTWHMYDTVKGSDWLGDQDAIEYMVREAPQAVYELEHAGVPFSRNADGTIY
QRPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFFIEYFAIDLIMDGG
KCVGVIALCLDDGSIHRFRSQAVVLATGGYGRSYYTATSAHTCTGDGGGMVLRAGLPLQD
MEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRSMAL
EIREGRGVGPHKDHIYLHLDHIDPKVLAERLPGITESGKIFAGVDLTRQPLPVVPTVHYN
MGGIPCNYHGEVVTIGPDGNPDTVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRAT
GHRLKEIVKAGAAQPELPKDSADMALTRLDHFRNANGGSPTAEVRTEMQRTMSAHAAVFR
TDELMVEGKQKLADTYERMQDIKVTDRGLIWNSDLVETLELDNLISQASVTLHGAQARKE
SRGAHAHEDFPNRDDANWMKHTVGWFNGWGGNGGEVRLDYRPVHEYTLTDDVEYIKPKAR
VY
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgtccgcccctgcttacaagatcatcgaccacatctatgacaccgtcgtcgtcggcgcc
ggtggttcgggtctgcgtgccacgatgggctcggccgaagccggcctgaagaccgcgtgc
atcaccaaggtcttcccgacccgttcgcacaccgttgcggcgcagggcggcatcgccgcc
tcgctgcagaacaacacgccggaccactggacctggcacatgtacgacaccgtcaagggg
tcggactggctgggtgaccaggacgccatcgaatacatggtgcgcgaagctccgcaggcg
gtctacgagctggagcacgccggtgtgcccttcagccgcaacgccgacggcacgatctac
cagcgcccgttcggcggccacatgcagaacatgggcgaaggcccgccggtgcagcgcact
tgcgccgccgccgaccgtaccggtcacgccatgctgcacgcgctgtaccagcagtcgctg
aagtatgacgcggacttcttcatcgaatacttcgcgatcgacctgatcatggacggcggc
aagtgcgtcggcgtgattgcgctgtgccttgatgacggctcgatccaccgcttccgctcg
caggccgtcgtgcttgcgaccggtggttacggccgcagctactacaccgccacttcggcc
catacgtgcaccggcgacggtggcggcatggtcctgcgcgccggcctgcccctgcaggac
atggaattcgtgcagttccacccgaccggcatctacggcgcgggcgtgctcatcaccgaa
ggcgcgcgcggcgagggcggctaccttaccaattccgaaggcgagcgcttcatggagcgc
tacgcgccttccgcgaaggacctcgcctcgcgcgatgtcgtctcgcgctcgatggcgctg
gaaatccgcgaaggccgcggcgtcggtccgcacaaggaccacatctacctgcacctcgat
cacatcgatcccaaggtgctggcagagcgtctgccgggcatcaccgagagcggcaagatc
tttgcgggcgtcgacctgacccgccagccgctgccggtcgtcccgaccgtgcactacaac
atgggcggcatcccctgtaactatcacggcgaagtcgtgaccatcggcccggacggcaat
ccggacaccgtggtcccgggcctgttcgctgtgggcgaagccgcatgcgtttcggtccat
ggcgccaatcgcctgggttcgaactcgctgatcgacctcgtggtcttcggccgtgcgacc
ggccaccgcctcaaggaaatcgtcaaggccggcgcagcgcagcccgaactgccgaaggac
tcggcggacatggctctcacccgcctcgaccacttccgcaatgccaacggcggttcgccg
accgcggaagtccgcaccgagatgcagcgtacgatgtcggctcacgccgcagtgttccgc
accgacgaactcatggtcgaaggcaagcagaagctcgccgacacctatgagcgcatgcag
gacatcaaggtcaccgaccgcggcctgatctggaactcggacctggtggaaacgctggaa
ctcgacaacctgatctcgcaggcttcggtaacgctgcacggcgcgcaggcgcgcaaggaa
agccgcggcgcccacgcgcacgaggacttcccgaaccgcgacgacgcgaactggatgaag
cacactgtcggctggttcaacggctggggcggcaacggcggcgaagtccgtctcgactac
cgtccggtccacgaatatacgctcaccgacgatgtcgagtacatcaagcccaaggcgcgc
gtttactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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