KEGG   Novosphingobium sp. PP1Y: PP1Y_AT33834Help
Entry
PP1Y_AT33834      CDS       T01515                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:npp00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PP1Y_AT33834
Enzymes [BR:npp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PP1Y_AT33834
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PP1Y_AT33834
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
3542004..3542816
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTVRGLARFLEGERIARIAVNRPDLRRPFPPDLVQVMTGATVTAMGRRAKYG
LIHSDRGQTMVFHLGMSGRWRIEPERPEKHDHLVIETGSGHVLALNDARRFGSVDLVATD
GLETWGPFADMGPEPLGDALTAAHLRAAFKDRTAPIKQLLLDQSIVAGLGNIYVCEALFR
SGIRPDKAAGRVSLAALARLVPAIREVLTESIAAGGSTIRDYAQPTGELGYFATSWQVYG
REGLACTCGAPVLRFVQGGRSTFWCRRCQK
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccagagctacccgaagtcgaaacgaccgtgcgcggccttgcccgctttctcgagggc
gagaggattgcccgcattgcggtcaaccgccccgacttgcgccgccccttcccgcccgat
ctcgtgcaggtaatgaccggcgcgacggtgaccgcgatggggcgccgggcgaaatacggg
ttgatccatagcgaccgcggccagaccatggtcttccatctcggcatgtcggggcgctgg
cggatcgagccggagcggccggaaaagcacgaccacctcgtgatcgaaacgggctccggc
catgtccttgcactcaacgacgcccggcgtttcggctcggtcgaccttgtcgccacggat
gggctggaaacatggggcccgttcgccgacatgggtccggaaccgctgggagacgcgctc
acggccgcgcaccttcgcgctgccttcaaggaccggaccgcgccgatcaagcagctcctg
ctcgaccagtcgatcgtggccggtctgggcaacatctatgtatgtgaggcgctgttccgg
tccggcatccgccctgacaaggcagcgggccgggtttccctggccgccctcgcccgcctc
gtcccggcgatccgcgaagtgctgaccgaatcgatcgcggccggcgggtcgaccattcgc
gactatgcgcagccgaccggcgaactgggttacttcgccacgtcctggcaagtctacggc
cgcgaggggctagcctgcacctgcggcgcgccggtcctgcgctttgtgcaaggcgggcgc
agcaccttctggtgcaggcgctgccagaagtag

DBGET integrated database retrieval system